myRT

myRT report for GCA_001530185.1_ASM153018v1

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Seq: LPFL01000038.1 Burkholderia cepacia strain MSMB1486WGS MSMB1486WGS_44, whole genome shotgun sequence (391366 bp)
Overview 1 RT 1: 294725-300021 bp Neighborhood of RT #1 [294725, 300021] MFS_MucK Histone_HNS RVT-Retrons FIN Feature: gene Location: 294725-295972 bp Feature: domain Description: MFS_MucK Location: 294815-295949 bp Feature: domain Description: MFS_MucK Location: 29481 5-295949 bp Feature: gene Location: 296270-296599 bp Feature: domain Description: Histone_HNS Location: 296291-296528 bp Feature: domain Description: Histone_HNS Location: 296291 -296528 bp Feature: gene Location: 296949-298298 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 297414-298050 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29741 4-298050 bp Feature: gene Location: 298552-299124 bp Feature: domain Description: FIN Location: 298729-299086 bp Feature: domain Description: FIN Location: 298729-299086 bp Feature: gene Location: 299749-300021 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MucK (cd17371), Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389)

Seq: LPFL01000036.1 Burkholderia cepacia strain MSMB1486WGS MSMB1486WGS_42, whole genome shotgun sequence (264896 bp)
Overview 1 RT 1: 151524-158667 bp Neighborhood of RT #1 [151524, 158684] rep CytC5 CytC5 RVT_N RVT-GII GIIM HNHc HTH_19 Feature: gene Location: 151524-153611 bp Feature: domain Description: rep Location: 151539-153531 bp Feature: domain Description: rep Location: 151539-153531 bp Feature: gene Location: 153736-154629 bp Feature: domain Description: CytC5 Location: 153886-154204 bp Feature: domain Description: CytC5 Location: 153886-1542 04 bp Feature: domain Description: CytC5 Location: 154273-154621 bp Feature: domain Description: CytC5 Location: 1542 73-15462 1 bp Feature: gene Location: 154792-156492 bp Feature: RT Description: RVT_N Location: 154849-155092 bp Feature: RT Description: RVT_N Location: 154849-155092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 155137-155785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 155137-155785 bp Feature: domain Description: GIIM Note: maturase Location: 155836-156070 bp Feature: domain Description: GIIM Note: maturase Location: 155836-156070 bp Feature: domain Description: HNHc Note: nucleases Location: 156313-156454 bp Feature: domain Description: HNHc Note: nucleases Location: 156313-156454 bp Feature: gene Location: 157228-157557 bp Feature: gene Location: 158355-158684 bp Feature: domain Description: HTH_19 Location: 158523-158667 bp Feature: domain Description: HTH_19 Location: 15852 3-158667 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rep (TIGR01074), CytC5 (COG3245), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), HTH_19 (pfam12844)