myRT

myRT report for GCA_001530415.1_ASM153041v1

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Seq: LPFW01000008.1 Burkholderia cepacia strain MSMB1513WGS MSMB1513WGS_17, whole genome shotgun sequence (249661 bp)
Overview 1 RT 1: 91346-96619 bp Neighborhood of RT #1 [91346, 96642] FIN RVT-Retrons Histone_HNS MFS_MucK Feature: gene Location: 91346-91618 bp Feature: gene Location: 92243-92815 bp Feature: domain Description: FIN Location: 92420-92777 bp Feature: domain Description: FIN Location: 92420-92777 bp Feature: gene Location: 93069-94418 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 93534-94170 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 93534-941 70 bp Feature: gene Location: 94768-95097 bp Feature: domain Description: Histone_HNS Location: 94789-95026 bp Feature: domain Description: Histone_HNS Location: 94789-95026 bp Feature: gene Location: 95395-96642 bp Feature: domain Description: MFS_MucK Location: 95485-96619 bp Feature: domain Description: MFS_MucK Location: 95485-9661 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816), MFS_MucK (cd17371)

Seq: LPFW01000085.1 Burkholderia cepacia strain MSMB1513WGS MSMB1513WGS_87, whole genome shotgun sequence (264849 bp)
Overview 1 RT 1: 151477-158620 bp Neighborhood of RT #1 [151477, 158637] rep CytC5 CytC5 RVT_N RVT-GII GIIM HNHc HTH_19 Feature: gene Location: 151477-153564 bp Feature: domain Description: rep Location: 151492-153484 bp Feature: domain Description: rep Location: 151492 -153484 bp Feature: gene Location: 153689-154582 bp Feature: domain Description: CytC5 Location: 153839-154157 bp Feature: domain Description: CytC5 Location: 153839-154157 bp Feature: domain Description: CytC5 Location: 154226-154574 bp Feature: domain Description: CytC5 Location: 1542 2 6-154574 bp Feature: gene Location: 154745-156445 bp Feature: RT Description: RVT_N Location: 154802-155045 bp Feature: RT Description: RVT_N Location: 154802 -155045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 155090-155738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 155090-155738 bp Feature: domain Description: GIIM Note: maturase Location: 155789-156023 bp Feature: domain Description: GIIM Note: maturase Location: 155789-15602 3 bp Feature: domain Description: HNHc Note: nucleases Location: 156266-156407 bp Feature: domain Description: HNHc Note: nucleases Location: 1562 66-156407 bp Feature: gene Location: 157181-157534 bp Feature: gene Location: 158308-158637 bp Feature: domain Description: HTH_19 Location: 158476-158620 bp Feature: domain Description: HTH_19 Location: 158476-15862 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rep (TIGR01074), CytC5 (COG3245), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), HTH_19 (pfam12844)