myRT

myRT report for GCA_001530545.1_ASM153054v1

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Seq: LPGL01000078.1 Burkholderia ubonensis strain MSMB1628WGS MSMB1628WGS_68, whole genome shotgun sequence (314172 bp)
Overview 1 RT 1: 276159-278985 bp Neighborhood of RT #1 [276159, 279008] HTH_ARSR RVT-DGRs Avd_like DUF1566 Feature: gene Location: 276159-276590 bp Feature: domain Description: HTH_ARSR Location: 276177-276309 bp Feature: domain Description: HTH_ARSR Location: 2761 77-276309 bp Feature: gene Location: 276619-276819 bp Feature: gene Location: 276816-277829 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 276906-277671 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 276906-277671 bp Feature: gene Location: 278173-278529 bp Feature: domain Description: Avd_like Location: 278200-278506 bp Feature: domain Description: Avd_like Location: 278200-278506 bp Feature: gene Location: 278544-279008 bp Feature: domain Description: DUF1566 Location: 278805-278985 bp Feature: domain Description: DUF1 566 Location: 278805-278985 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_ARSR (smart00418), RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)

Seq: LPGL01000084.1 Burkholderia ubonensis strain MSMB1628WGS MSMB1628WGS_73, whole genome shotgun sequence (109412 bp)
Overview 1 RT 1: 107087-108783 bp Neighborhood of RT #1 [107087, 109163] CheX REC RVT-GII Feature: gene Location: 107087-108046 bp Feature: domain Description: CheX Location: 107603-107903 bp Feature: domain Description: CheX Location: 107603-107903 bp Feature: gene Location: 108089-108454 bp Feature: domain Description: REC Location: 108104-108446 bp Feature: domain Description: REC Location: 108104-108446 bp Feature: gene Location: 108513-109163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108528-108783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10852 8-108783 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CheX (pfam13690), REC (smart00448), RVT-GII

Seq: LPGL01000083.1 Burkholderia ubonensis strain MSMB1628WGS MSMB1628WGS_72, whole genome shotgun sequence (1922 bp)
Overview 1 RT 1: 62-1466 bp Neighborhood of RT #1 [62, 1861] RVT-GII Feature: gene Location: 62-1861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 776-1466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 776-1466 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: LPGL01000012.1 Burkholderia ubonensis strain MSMB1628WGS MSMB1628WGS_11, whole genome shotgun sequence (294855 bp)
Overview 1 RT 1: 122102-128198 bp Neighborhood of RT #1 [122102, 128209] PRK00180 DUF3141 RVT-Retrons VOC Cupin_6 AraC Feature: gene Location: 122102-122383 bp Feature: domain Description: PRK00180 Location: 122285-122375 bp Feature: domain Description: PRK00180 Location: 122285-122375 bp Feature: gene Location: 122393-124651 bp Feature: domain Description: DUF3141 Location: 122519-124250 bp Feature: domain Description: DUF314 1 Location: 122519-124 250 bp Feature: gene Location: 124900-126249 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 125365-126001 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 125365-126001 bp Feature: gene Location: 126552-126938 bp Feature: domain Description: VOC Location: 126567-126888 bp Feature: domain Description: VOC Location: 126567-126888 bp Feature: gene Location: 127382-128209 bp Feature: domain Description: Cupin_6 Location: 127391-127850 bp Feature: domain Description: Cupin_6 Location: 127391-127850 bp Feature: domain Description: AraC Location: 127859-128198 bp Feature: domain Description: AraC Location: 127859-128198 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00180 (acetate kinase A/propionate kinase 2; Reviewed), DUF3141 (pfam11339), RVT-Retrons, VOC (cl14632), Cupin_6 (pfam12852), AraC (COG2207)