myRT

myRT report for GCA_001530755.1_ASM153075v1

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Seq: LPFO01000023.1 Burkholderia ubonensis strain MSMB1489WGS MSMB1489WGS_16, whole genome shotgun sequence (256054 bp)
Overview 1 RT 1: 57921-63956 bp Neighborhood of RT #1 [57921, 63961] M20_Acy1-like MFS_CitA RVT-GII GIIM gram_neg_porins DoxX Feature: gene Location: 57921-59102 bp Feature: domain Description: M20_Acy1-like Location: 57972-59085 bp Feature: domain Description: M20_Acy1 -like Location: 57972-59085 bp Feature: gene Location: 59144-60457 bp Feature: domain Description: MFS_CitA Location: 59219-60437 bp Feature: domain Description: MFS_CitA Location: 5921 9-60437 bp Feature: gene Location: 60553-61917 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60886-61501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60886-61 501 bp Feature: domain Description: GIIM Note: maturase Location: 61558-61774 bp Feature: domain Description: GIIM Note: maturase Location: 61 558-61 774 bp Feature: gene Location: 62382-63485 bp Feature: domain Description: gram_neg_porins Location: 62448-63483 bp Feature: domain Description: gram_neg_porins Location: 62448-63483 bp Feature: gene Location: 63542-63961 bp Feature: domain Description: DoxX Location: 63578-63956 bp Feature: domain Description: DoxX Location: 63578-63956 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT M20_Acy1-like (cd08660), MFS_CitA (cd17368), RVT-GII, GIIM (pfam08388), gram_neg_porins (cd00342), DoxX (pfam07681)

Seq: LPFO01000059.1 Burkholderia ubonensis strain MSMB1489WGS MSMB1489WGS_49, whole genome shotgun sequence (214126 bp)
Overview 1 RT 1: 6579-13647 bp Neighborhood of RT #1 [6579, 13664] PRK09221 ALDH_F6_MMSDH RVT-GII GIIM YrpB MhpC Feature: gene Location: 6579-7937 bp Feature: domain Description: PRK09221 Location: 6609-7932 bp Feature: domain Description: PRK092 2 1 Location: 6609-7932 bp Feature: gene Location: 7991-9508 bp Feature: domain Description: ALDH_F6_MMSDH Location: 8030-9455 bp Feature: domain Description: ALDH_F6_MMSDH Location: 8030-9455 bp Feature: gene Location: 10024-11430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10363-10978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10363-10978 bp Feature: domain Description: GIIM Note: maturase Location: 11032-11251 bp Feature: domain Description: GIIM Note: maturase Location: 11032 -112 51 bp Feature: gene Location: 11535-12494 bp Feature: domain Description: YrpB Location: 11559-12477 bp Feature: domain Description: YrpB Location: 11559-12 477 bp Feature: gene Location: 12768-13664 bp Feature: domain Description: MhpC Location: 12804-13647 bp Feature: domain Description: MhpC Location: 12 804-13647 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YrpB (COG2070), MhpC (COG0596), PRK09221 (beta alanine--pyruvate transaminase; Provisional), ALDH_F6_MMSDH (cd07085)

Seq: LPFO01000031.1 Burkholderia ubonensis strain MSMB1489WGS MSMB1489WGS_23, whole genome shotgun sequence (294123 bp)
Overview 1 RT 1: 188726-194716 bp Neighborhood of RT #1 [188726, 194716] Cupin_6 AraC VOC RVT-Retrons DUF3141 Feature: gene Location: 188726-189553 bp Feature: domain Description: Cupin_6 Location: 188735-189194 bp Feature: domain Description: Cupin_6 Location: 18873 5-189194 bp Feature: domain Description: AraC Location: 189203-189542 bp Feature: domain Description: AraC Location: 189203 -189542 bp Feature: gene Location: 189992-190378 bp Feature: domain Description: VOC Location: 190007-190328 bp Feature: domain Description: VOC Location: 190007-1903 28 bp Feature: gene Location: 190689-192038 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 191154-191790 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 191154-191790 bp Feature: gene Location: 192269-194527 bp Feature: domain Description: DUF3141 Location: 192395-194126 bp Feature: domain Description: DUF3 141 Location: 1923 95-194126 bp Feature: gene Location: 194537-194716 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cupin_6 (pfam12852), AraC (COG2207), VOC (cl14632), RVT-Retrons, DUF3141 (pfam11339)