myRT

myRT report for GCA_001530825.1_ASM153082v1

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Seq: LPGM01000008.1 Burkholderia ubonensis strain MSMB1629WGS MSMB1629WGS_106, whole genome shotgun sequence (125519 bp)
Overview 1 RT 1: 31215-33783 bp Neighborhood of RT #1 [31215, 34064] DUF1566 Avd_like RVT-DGRs HTH_ARSR Feature: gene Location: 31215-31679 bp Feature: domain Description: DUF1566 Location: 31476-31656 bp Feature: domain Description: DUF1 566 Location: 31 476-31 656 bp Feature: gene Location: 31694-32050 bp Feature: domain Description: Avd_like Location: 31721-32027 bp Feature: domain Description: Avd_like Location: 31 721 -32027 bp Feature: gene Location: 32394-33407 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 32484-33249 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 32484-33249 bp Feature: gene Location: 33404-33604 bp Feature: gene Location: 33633-34064 bp Feature: domain Description: HTH_ARSR Location: 33651-33783 bp Feature: domain Description: HTH_ARSR Location: 33651 -33783 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs, HTH_ARSR (smart00418)

Seq: LPGM01000012.1 Burkholderia ubonensis strain MSMB1629WGS MSMB1629WGS_11, whole genome shotgun sequence (1922 bp)
Overview 1 RT 1: 62-1466 bp Neighborhood of RT #1 [62, 1861] RVT-GII Feature: gene Location: 62-1861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 776-1466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 776-1466 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: LPGM01000069.1 Burkholderia ubonensis strain MSMB1629WGS MSMB1629WGS_57, whole genome shotgun sequence (294855 bp)
Overview 1 RT 1: 122102-128198 bp Neighborhood of RT #1 [122102, 128209] PRK00180 DUF3141 RVT-Retrons VOC Cupin_6 AraC Feature: gene Location: 122102-122383 bp Feature: domain Description: PRK00180 Location: 122285-122375 bp Feature: domain Description: PRK00180 Location: 122285-1223 75 bp Feature: gene Location: 122393-124651 bp Feature: domain Description: DUF3141 Location: 122519-124250 bp Feature: domain Description: DUF3 141 Location: 122519-124250 bp Feature: gene Location: 124900-126249 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 125365-126001 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1253 65-126001 bp Feature: gene Location: 126552-126938 bp Feature: domain Description: VOC Location: 126567-126888 bp Feature: domain Description: VOC Location: 126567-126888 bp Feature: gene Location: 127382-128209 bp Feature: domain Description: Cupin_6 Location: 127391-127850 bp Feature: domain Description: Cupin_6 Location: 1273 91-127850 bp Feature: domain Description: AraC Location: 127859-128198 bp Feature: domain Description: AraC Location: 127859-128198 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00180 (acetate kinase A/propionate kinase 2; Reviewed), DUF3141 (pfam11339), RVT-Retrons, VOC (cl14632), Cupin_6 (pfam12852), AraC (COG2207)

Seq: LPGM01000070.1 Burkholderia ubonensis strain MSMB1629WGS MSMB1629WGS_58, whole genome shotgun sequence (108854 bp)
Overview 1 RT 1: 106967-108663 bp Neighborhood of RT #1 [106967, 108854] CheX REC RVT-GII Feature: gene Location: 106967-107926 bp Feature: domain Description: CheX Location: 107483-107783 bp Feature: domain Description: CheX Location: 1074 83-107783 bp Feature: gene Location: 107969-108334 bp Feature: domain Description: REC Location: 107984-108326 bp Feature: domain Description: REC Location: 107984 -108326 bp Feature: gene Location: 108393-108854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108408-108663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1084 08-108663 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CheX (pfam13690), REC (smart00448), RVT-GII