myRT

myRT report for GCA_001531135.1_ASM153113v1

Download annotations/find similar RTs

Seq: LRMG01000240.1 Acinetobacter baumannii strain ORABAshR GCID_ACINM_00016_NODE_8.ctg_1, whole genome shotgun sequence (106568 bp)
Overview 1 RT 1: 21081-27475 bp Neighborhood of RT #1 [21081, 27501] TIGR02646 COG3950 RVT-Retrons CirA COG5515 Feature: gene Location: 21081-21722 bp Feature: domain Description: TIGR02646 Location: 21180-21549 bp Feature: domain Description: TIGR02646 Location: 21 1 80-21 549 bp Feature: gene Location: 21727-23271 bp Feature: domain Description: COG3950 Location: 21901-23050 bp Feature: domain Description: COG3950 Location: 21 901 -23050 bp Feature: gene Location: 23272-24147 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23311-23911 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2331 1 -2391 1 bp Feature: gene Location: 24870-27059 bp Feature: domain Description: CirA Location: 24963-27057 bp Feature: domain Description: CirA Location: 24963-27057 bp Feature: gene Location: 27289-27501 bp Feature: domain Description: COG5515 Location: 27292-27475 bp Feature: domain Description: COG551 5 Location: 27292-27475 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, CirA (COG1629), COG5515 (Uncharacterized protein )

Seq: LRMG01000184.1 Acinetobacter baumannii strain ORABAshR GCID_ACINM_00016_NODE_3.ctg_1, whole genome shotgun sequence (167000 bp)
Overview 1 RT 1: 85810-91000 bp Neighborhood of RT #1 [85810, 91431] PaaY PaaD RVT-Retrons TetR_N Feature: gene Location: 85810-86415 bp Feature: domain Description: PaaY Location: 85819-86359 bp Feature: domain Description: PaaY Location: 85819-86359 bp Feature: gene Location: 86493-86876 bp Feature: domain Description: PaaD Location: 86535-86868 bp Feature: domain Description: PaaD Location: 86535-86868 bp Feature: gene Location: 87237-88409 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 87492-88146 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 87492 -88146 bp Feature: gene Location: 88615-89841 bp Feature: gene Location: 90829-91431 bp Feature: domain Description: TetR_N Location: 90877-91000 bp Feature: domain Description: TetR_N Location: 90877-91000 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PaaY (TIGR02287), PaaD (TIGR02286), RVT-Retrons, TetR_N (pfam00440)