myRT

myRT report for GCA_001532035.1_ASM153203v1

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Seq: LPJR01000024.1 Burkholderia pseudomultivorans strain MSMB368WGS MSMB368WGS_30, whole genome shotgun sequence (181348 bp)
Overview 1 RT 1: 43315-49459 bp Neighborhood of RT #1 [43315, 49470] PssA PRK05305 RVT_N RVT-GII GIIM HNHc PRK05479 ilvH Feature: gene Location: 43315-44187 bp Feature: domain Description: PssA Location: 43450-44131 bp Feature: domain Description: PssA Location: 43450-441 31 bp Feature: gene Location: 44203-44847 bp Feature: domain Description: PRK05305 Location: 44227-44839 bp Feature: domain Description: PRK05305 Location: 44227-44839 bp Feature: gene Location: 44964-46676 bp Feature: RT Description: RVT_N Location: 45021-45264 bp Feature: RT Description: RVT_N Location: 45021 -45264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45309-45957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45309-45957 bp Feature: domain Description: GIIM Note: maturase Location: 46008-46242 bp Feature: domain Description: GIIM Note: maturase Location: 46008-46242 bp Feature: domain Description: HNHc Note: nucleases Location: 46473-46626 bp Feature: domain Description: HNHc Note: nucleases Location: 46473-46626 bp Feature: gene Location: 47868-48884 bp Feature: domain Description: PRK05479 Location: 47871-48852 bp Feature: domain Description: PRK05479 Location: 47871 -48852 bp Feature: gene Location: 48979-49470 bp Feature: domain Description: ilvH Location: 48982-49459 bp Feature: domain Description: ilvH Location: 48982-49459 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PssA (COG1183), PRK05305 (phosphatidylserine decarboxylase family protein), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK05479 (ketol-acid reductoisomerase; Provisional), ilvH (PRK11895)

Seq: LPJR01000025.1 Burkholderia pseudomultivorans strain MSMB368WGS MSMB368WGS_31, whole genome shotgun sequence (322215 bp)
Overview 1 RT 1: 97684-103738 bp Neighborhood of RT #1 [97684, 103746] MFS_MucK Histone_HNS RVT-Retrons PRK06138 CypX Feature: gene Location: 97684-98931 bp Feature: domain Description: MFS_MucK Location: 97774-98908 bp Feature: domain Description: MFS_MucK Location: 97774-98908 bp Feature: gene Location: 99223-99552 bp Feature: domain Description: Histone_HNS Location: 99247-99481 bp Feature: domain Description: Histone_HNS Location: 992 47-99481 bp Feature: gene Location: 99904-101253 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 100369-101005 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 100369-101005 bp Feature: gene Location: 101537-102337 bp Feature: domain Description: PRK06138 Location: 101546-102323 bp Feature: domain Description: PRK06138 Location: 101546-102 32 3 bp Feature: gene Location: 102436-103746 bp Feature: domain Description: CypX Location: 102547-103738 bp Feature: domain Description: CypX Location: 102 547-103738 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06138 (SDR family oxidoreductase), CypX (COG2124), MFS_MucK (cd17371), Histone_HNS (pfam00816), RVT-Retrons

Seq: LPJR01000029.1 Burkholderia pseudomultivorans strain MSMB368WGS MSMB368WGS_35, whole genome shotgun sequence (508557 bp)
Overview 1 RT 1: 295598-300168 bp Neighborhood of RT #1 [295598, 300168] Dcm Dcm RVT-DGRs Avd_like Feature: gene Location: 295598-295879 bp Feature: gene Location: 295898-297943 bp Feature: domain Description: Dcm Location: 295949-296759 bp Feature: domain Description: Dcm Location: 295949-296759 bp Feature: domain Description: Dcm Location: 297689-297896 bp Feature: domain Description: Dcm Location: 297689-297896 bp Feature: gene Location: 297967-298989 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 298057-298822 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 298057-298822 bp Feature: gene Location: 299312-299689 bp Feature: domain Description: Avd_like Location: 299339-299645 bp Feature: domain Description: Avd_like Location: 2993 3 9-299645 bp Feature: gene Location: 299704-300168 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dcm (COG0270), RVT-DGRs, Avd_like (cd16376)