myRT

myRT report for GCA_001532605.1_ASM153260v1

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Seq: LPIW01000052.1 Burkholderia ubonensis strain MSMB2166WGS MSMB2166WGS_57, whole genome shotgun sequence (351423 bp)
Overview 1 RT 1: 341691-347703 bp Neighborhood of RT #1 [341691, 348119] AraC Glyoxalase RVT-Retrons AcrR DUF3141 Feature: gene Location: 341691-342518 bp Ori: KWD95071.1 Feature: domain Description: AraC Location: 342153-342507 bp Feature: domain Description: AraC Location: 3421 53-342507 bp Feature: gene Location: 342971-343357 bp Ori: KWD95107.1 Feature: domain Description: Glyoxalase Location: 342977-343307 bp Feature: domain Description: Glyoxalase Location: 342977-343307 bp Feature: gene Location: 343660-345009 bp Ori: KWD95072.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 344125-344761 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3441 25-344761 bp Feature: gene Location: 345035-345541 bp Ori: KWD95073.1 Feature: domain Description: AcrR Location: 345038-345437 bp Feature: domain Description: AcrR Location: 345038-345437 bp Feature: gene Location: 345846-348119 bp Ori: KWD95074.1 Feature: domain Description: DUF3141 Location: 345972-347703 bp Feature: domain Description: DUF31 41 Location: 345972-347703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraC (COG2207), Glyoxalase (pfam00903), RVT-Retrons, AcrR (COG1309), DUF3141 (pfam11339)

Seq: LPIW01000050.1 Burkholderia ubonensis strain MSMB2166WGS MSMB2166WGS_55, whole genome shotgun sequence (38084 bp)
Overview 1 RT 1: 35420-38028 bp Neighborhood of RT #1 [35420, 38028] CheX REC RVT-GII Feature: gene Location: 35420-36379 bp Ori: KWD95270.1 Feature: domain Description: CheX Location: 35936-36236 bp Feature: domain Description: CheX Location: 35936-362 36 bp Feature: gene Location: 36422-36787 bp Ori: KWD95271.1 Feature: domain Description: REC Location: 36437-36779 bp Feature: domain Description: REC Location: 36437-36779 bp Feature: gene Location: 36846-37466 bp Ori: KWD95272.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36858-37116 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36858-37116 bp Feature: gene Location: 37645-38028 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CheX (pfam13690), REC (smart00448), RVT-GII

Seq: LPIW01000089.1 Burkholderia ubonensis strain MSMB2166WGS MSMB2166WGS_90, whole genome shotgun sequence (179784 bp)
Overview 1 RT 1: 3895-12215 bp Neighborhood of RT #1 [3895, 12220] RVT-G2L AIPR RVT-Retrons COG3450 Feature: gene Location: 3895-4722 bp Ori: KWD88700.1 Feature: RT Description: RVT-G2L Note: G2L RT Location: 3898-4402 bp Feature: RT Description: RVT-G2L Note: G2L RT Location: 3 898-4402 bp Feature: gene Location: 5192-6355 bp Ori: KWD88701.1 Feature: domain Description: AIPR Location: 5348-6182 bp Feature: domain Description: AIPR Location: 53 48-6182 bp Feature: gene Location: 6597-7379 bp Feature: gene Location: 7502-7732 bp Feature: gene Location: 7801-8565 bp Feature: gene Location: 9259-9765 bp Ori: KWD88704.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9265-9508 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9265-9508 bp Feature: gene Location: 10160-10918 bp Feature: gene Location: 11876-12220 bp Ori: KWD88706.1 Feature: domain Description: COG3450 Location: 11879-12215 bp Feature: domain Description: COG3 450 Location: 11879-12215 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-G2L, AIPR (pfam10592), RVT-Retrons, COG3450 (Predicted enzyme of the cupin superfamily )