myRT

myRT report for GCA_001532625.1_ASM153262v1

Download annotations/find similar RTs

Seq: LPIX01000097.1 Burkholderia ubonensis strain MSMB2167WGS MSMB2167WGS_81, whole genome shotgun sequence (170798 bp)
Overview 1 RT 1: 3820-12215 bp Neighborhood of RT #1 [3820, 12220] RVT-G2L AIPR RVT-Retrons COG3450 Feature: gene Location: 3820-4722 bp Ori: KWD94471.1 Feature: RT Description: RVT-G2L Note: G2L RT Location: 3823-4402 bp Feature: RT Description: RVT-G2L Note: G2L RT Location: 3823-4402 bp Feature: gene Location: 5192-6121 bp Ori: KWD94472.1 Feature: domain Description: AIPR Location: 5195-5954 bp Feature: domain Description: AIPR Location: 51 95-5954 bp Feature: gene Location: 6185-6403 bp Feature: gene Location: 7502-7732 bp Feature: gene Location: 7801-8565 bp Feature: gene Location: 9259-9816 bp Ori: KWD94476.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9289-9559 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9289-9559 bp Feature: gene Location: 10160-10918 bp Feature: gene Location: 11876-12220 bp Ori: KWD94478.1 Feature: domain Description: COG3450 Location: 11879-12215 bp Feature: domain Description: COG3450 Location: 1 1 879-1 221 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-G2L, AIPR (pfam10592), RVT-Retrons, COG3450 (Predicted enzyme of the cupin superfamily )

Seq: LPIX01000048.1 Burkholderia ubonensis strain MSMB2167WGS MSMB2167WGS_37, whole genome shotgun sequence (351190 bp)
Overview 1 RT 1: 341458-347470 bp Neighborhood of RT #1 [341458, 347886] AraC Glyoxalase RVT-Retrons AcrR DUF3141 Feature: gene Location: 341458-342285 bp Ori: KWE04498.1 Feature: domain Description: AraC Location: 341920-342274 bp Feature: domain Description: AraC Location: 34192 0-342 2 74 bp Feature: gene Location: 342738-343124 bp Ori: KWE04499.1 Feature: domain Description: Glyoxalase Location: 342744-343074 bp Feature: domain Description: Glyoxalase Location: 342 744-343074 bp Feature: gene Location: 343427-344776 bp Ori: KWE04500.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 343892-344528 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 343892 -34452 8 bp Feature: gene Location: 344802-345308 bp Ori: KWE04501.1 Feature: domain Description: AcrR Location: 344805-345204 bp Feature: domain Description: AcrR Location: 344805-3452 04 bp Feature: gene Location: 345613-347886 bp Ori: KWE04502.1 Feature: domain Description: DUF3141 Location: 345739-347470 bp Feature: domain Description: DUF3141 Location: 345739-347470 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraC (COG2207), Glyoxalase (pfam00903), RVT-Retrons, AcrR (COG1309), DUF3141 (pfam11339)