myRT

myRT report for GCA_001532865.1_ASM153286v1

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Seq: LPJN01000056.1 Burkholderia ubonensis strain MSMB2152WGS MSMB2152WGS_52, whole genome shotgun sequence (207634 bp)
Overview 1 RT 1: 75506-82376 bp Neighborhood of RT #1 [75506, 82387] PRK07533 DUF3141 RVT-Retrons VOC Cupin_6 AraC Feature: gene Location: 75506-76285 bp Ori: KWF03799.1 Feature: domain Description: PRK07533 Location: 75524-76280 bp Feature: domain Description: PRK07533 Location: 75524-76280 bp Feature: gene Location: 76576-78834 bp Ori: KWF03800.1 Feature: domain Description: DUF3141 Location: 76702-78433 bp Feature: domain Description: DUF31 41 Location: 76702-78433 bp Feature: gene Location: 79083-80432 bp Ori: KWF03801.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 79548-80184 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 79548-801 84 bp Feature: gene Location: 80735-81121 bp Ori: KWF03802.1 Feature: domain Description: VOC Location: 80750-81071 bp Feature: domain Description: VOC Location: 80750-81 071 bp Feature: gene Location: 81560-82387 bp Ori: KWF03803.1 Feature: domain Description: Cupin_6 Location: 81569-82028 bp Feature: domain Description: Cupin_6 Location: 81 569-82028 bp Feature: domain Description: AraC Location: 82037-82376 bp Feature: domain Description: AraC Location: 82037-82376 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07533 (enoyl- reductase FabI), DUF3141 (pfam11339), RVT-Retrons, VOC (cl14632), Cupin_6 (pfam12852), AraC (COG2207)

Seq: LPJN01000017.1 Burkholderia ubonensis strain MSMB2152WGS MSMB2152WGS_17, whole genome shotgun sequence (221630 bp)
Overview 1 RT 1: 219211-221630 bp Neighborhood of RT #1 [219211, 221630] CheX REC RVT-GII Feature: gene Location: 219211-220170 bp Ori: KWF13298.1 Feature: domain Description: CheX Location: 219727-220027 bp Feature: domain Description: CheX Location: 2 1972 7-2 2 002 7 bp Feature: gene Location: 220213-220578 bp Ori: KWF13299.1 Feature: domain Description: REC Location: 220228-220570 bp Feature: domain Description: REC Location: 2 2 02 2 8-2 2 0570 bp Feature: gene Location: 220637-221251 bp Ori: KWF13300.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 220652-220907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 0652 -2 2 0907 bp Feature: gene Location: 221401-221630 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CheX (pfam13690), REC (smart00448), RVT-GII

Seq: LPJN01000007.1 Burkholderia ubonensis strain MSMB2152WGS MSMB2152WGS_105, whole genome shotgun sequence (97067 bp)
Overview 1 RT 1: 20720-26839 bp Neighborhood of RT #1 [20720, 26839] MPP_1 RVT-UG17 SLATT_5 Feature: gene Location: 20720-21472 bp Feature: gene Location: 21745-23070 bp Ori: KWF15212.1 Feature: domain Description: MPP_1 Location: 21763-22474 bp Feature: domain Description: MPP_1 Location: 21763 -22474 bp Feature: gene Location: 23447-24847 bp Ori: KWF15213.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 23684-24281 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 23 684-24281 bp Feature: gene Location: 24844-25476 bp Ori: KWF15214.1 Feature: domain Description: SLATT_5 Location: 24889-25456 bp Feature: domain Description: SLATT_5 Location: 24889-25456 bp Feature: gene Location: 26240-26839 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MPP_1 (cd07400), RVT-UG17, SLATT_5 (pfam18160)