myRT

myRT report for GCA_001533105.1_ASM153310v1

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Seq: LPJW01000068.1 Burkholderia cenocepacia strain MSMB383WGS MSMB383WGS_6, whole genome shotgun sequence (239125 bp)
Overview 1 RT 1: 127342-132692 bp Neighborhood of RT #1 [127342, 132697] MFS_MucK Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 127342-128589 bp Ori: KWF61588.1 Feature: domain Description: MFS_MucK Location: 127432-128566 bp Feature: domain Description: MFS_MucK Location: 1 27432-1 28566 bp Feature: gene Location: 128876-129205 bp Ori: KWF61589.1 Feature: domain Description: Histone_HNS Location: 128897-129134 bp Feature: domain Description: Histone_HNS Location: 1 28897-1 291 34 bp Feature: gene Location: 129531-130880 bp Ori: KWF61590.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 129996-130632 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 29996-1 30632 bp Feature: gene Location: 131134-131706 bp Ori: KWF61591.1 Feature: domain Description: FIN Location: 131320-131671 bp Feature: domain Description: FIN Location: 1 31 320-1 31 671 bp Feature: gene Location: 131942-132697 bp Ori: KWF61592.1 Feature: domain Description: his_ut_repres Location: 132020-132692 bp Feature: domain Description: his_ut_repres Location: 1 32020-1 32692 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MucK (cd17371), Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)

Seq: LPJW01000103.1 Burkholderia cenocepacia strain MSMB383WGS MSMB383WGS_91, whole genome shotgun sequence (125224 bp)
Overview 1 RT 1: 466-6175 bp 2 RT 2: 8967-16878 bp Neighborhood of RT #1 [466, 6312] PinE RVT-UG9 PRK05755 PRK14975 HNH_2 Neighborhood of RT #2 [8967, 16880] PriCT_2 COG4643 DUF927 RVT-UG16 PRK09692 PRK11798 Feature: gene Location: 466-1041 bp Ori: KWF52183.1 Feature: domain Description: PinE Location: 475-1024 bp Feature: domain Description: PinE Location: 475-102 4 bp Feature: gene Location: 1549-3249 bp Ori: KWF52184.1 Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 1819-2455 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 1819-2 455 bp Feature: gene Location: 3242-4834 bp Ori: KWF52185.1 Feature: domain Description: PRK05755 Location: 3554-3827 bp Feature: domain Description: PRK05755 Location: 3554-382 7 bp Feature: domain Description: PRK14975 Location: 4028-4733 bp Feature: domain Description: PRK14975 Location: 402 8-4733 bp Feature: gene Location: 5068-6312 bp Ori: KWF52186.1 Feature: domain Description: HNH_2 Location: 6028-6175 bp Feature: domain Description: HNH_2 Location: 602 8-6175 bp Feature: gene Location: 8967-9293 bp Feature: gene Location: 9421-12282 bp Ori: KWF52192.1 Feature: domain Description: PriCT_2 Location: 9445-9652 bp Feature: domain Description: PriCT_2 Location: 9445-9652 bp Feature: domain Description: COG4643 Location: 9715-10390 bp Feature: domain Description: COG4643 Location: 9715-10390 bp Feature: domain Description: DUF927 Location: 10522-11353 bp Feature: domain Description: DUF92 7 Location: 1052 2 -11353 bp Feature: gene Location: 13094-14590 bp Ori: KWF52193.1 Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 13457-13865 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 13457-13865 bp Feature: gene Location: 14862-16079 bp Ori: KWF52194.1 Feature: domain Description: PRK09692 Location: 14868-16053 bp Feature: domain Description: PRK09692 Location: 14868-16053 bp Feature: gene Location: 16359-16880 bp Ori: KWF52195.1 Feature: domain Description: PRK11798 Location: 16362-16878 bp Feature: domain Description: PRK11798 Location: 16362 -16878 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-UG9, PRK05755 (DNA polymerase I; Provisional), PRK14975 (bifunctional 3'-5' exonuclease/DNA polymerase; Provisional), HNH_2 (pfam13391), PriCT_2 (pfam08707), COG4643 (Uncharacterized domain associated with phage/plasmid primase ), DUF927 (pfam06048), RVT-UG16, PRK09692 (Integrase; provisional)
PRK11798 (ClpXP protease specificity-enhancing factor; Provisional)