myRT

myRT report for GCA_001533365.1_ASM153336v1

Download annotations/find similar RTs

Seq: LPJF01000057.1 Burkholderia ubonensis strain MSMB2207WGS MSMB2207WGS_61, whole genome shotgun sequence (246449 bp)
Overview 1 RT 1: 133828-140427 bp Neighborhood of RT #1 [133828, 140453] AraC VOC RVT-Retrons DUF3141 PRK11890 Feature: gene Location: 133828-134655 bp Feature: domain Description: AraC Location: 134290-134644 bp Feature: domain Description: AraC Location: 1 34290-1 34644 bp Feature: gene Location: 134998-135384 bp Feature: domain Description: VOC Location: 135013-135334 bp Feature: domain Description: VOC Location: 1 3501 3-1 35334 bp Feature: gene Location: 135686-137035 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 136151-136787 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 361 51 -1 36787 bp Feature: gene Location: 137244-139502 bp Feature: domain Description: DUF3141 Location: 137370-139101 bp Feature: domain Description: DUF31 41 Location: 1 37370-1 391 01 bp Feature: gene Location: 139512-140453 bp Feature: domain Description: PRK11890 Location: 139515-140427 bp Feature: domain Description: PRK1 1 890 Location: 1 3951 5-1 40427 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraC (COG2207), VOC (cl14632), RVT-Retrons, DUF3141 (pfam11339), PRK11890 (phosphate acetyltransferase; Provisional)

Seq: LPJF01000028.1 Burkholderia ubonensis strain MSMB2207WGS MSMB2207WGS_35, whole genome shotgun sequence (47231 bp)
Overview 1 RT 1: 42997-46703 bp Neighborhood of RT #1 [42997, 46855] LysR RVT-Retrons Trypsin_2 Feature: gene Location: 42997-43887 bp Feature: domain Description: LysR Location: 43009-43873 bp Feature: domain Description: LysR Location: 43009-43873 bp Feature: gene Location: 43952-44374 bp Feature: gene Location: 44972-46855 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 45143-45749 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 45143-45749 bp Feature: domain Description: Trypsin_2 Location: 46220-46703 bp Feature: domain Description: Trypsin_2 Location: 462 2 0-46703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), RVT-Retrons, Trypsin_2 (pfam13365)

Seq: LPJF01000060.1 Burkholderia ubonensis strain MSMB2207WGS MSMB2207WGS_64, whole genome shotgun sequence (1852 bp)
Overview 1 RT 1: 88-1294 bp Neighborhood of RT #1 [88, 1452] RVT-GII GIIM Feature: gene Location: 88-1452 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 421-1036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 421-103 6 bp Feature: domain Description: GIIM Note: maturase Location: 1093-1294 bp Feature: domain Description: GIIM Note: maturase Location: 1093 -1294 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)