myRT

myRT report for GCA_001533705.1_ASM153370v1

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Seq: LPLT01000033.1 Burkholderia stagnalis strain MSMB780WGS MSMB780WGS_4, whole genome shotgun sequence (168006 bp)
Overview 1 RT 1: 150701-159071 bp Neighborhood of RT #1 [150701, 159076] PRK01117 Hpt1 RVT-GII GIIM Kup Tex Feature: gene Location: 150701-152047 bp Ori: KWK67833.1 Feature: domain Description: PRK01117 Location: 150737-152042 bp Feature: domain Description: PRK01 1 1 7 Location: 1 50737-1 52042 bp Feature: gene Location: 152054-152644 bp Ori: KWK67834.1 Feature: domain Description: Hpt1 Location: 152111-152612 bp Feature: domain Description: Hpt1 Location: 1 521 1 1 -1 5261 2 bp Feature: gene Location: 153082-154452 bp Ori: KWK67835.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 153418-154033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5341 8-1 54033 bp Feature: domain Description: GIIM Note: maturase Location: 154087-154294 bp Feature: domain Description: GIIM Note: maturase Location: 1 54087-1 54294 bp Feature: gene Location: 154740-156659 bp Ori: KWK67836.1 Feature: domain Description: Kup Location: 154788-156657 bp Feature: domain Description: Kup Location: 1 54788-1 56657 bp Feature: gene Location: 156749-159076 bp Ori: KWK67837.1 Feature: domain Description: Tex Location: 156758-159071 bp Feature: domain Description: Tex Location: 1 56758-1 59071 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK01117 (adenylosuccinate synthetase; Provisional), Hpt1 (COG2236), RVT-GII, GIIM (pfam08388), Kup (COG3158), Tex (COG2183)

Seq: LPLT01000065.1 Burkholderia stagnalis strain MSMB780WGS MSMB780WGS_69, whole genome shotgun sequence (231752 bp)
Overview 1 RT 1: 80455-86779 bp Neighborhood of RT #1 [80455, 86779] HTH_XRE RVT-UG17 SLATT_5 Feature: gene Location: 80455-80802 bp Ori: KWK63473.1 Feature: domain Description: HTH_XRE Location: 80497-80668 bp Feature: domain Description: HTH_XRE Location: 80497-80668 bp Feature: gene Location: 82228-82716 bp Feature: gene Location: 83747-85147 bp Ori: KWK63356.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 83981-84593 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 83981-84593 bp Feature: gene Location: 85468-85992 bp Ori: KWK63357.1 Feature: domain Description: SLATT_5 Location: 85471-85954 bp Feature: domain Description: SLATT_5 Location: 85471-85954 bp Feature: gene Location: 86180-86779 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-UG17, SLATT_5 (pfam18160)