myRT

myRT report for GCA_001533745.1_ASM153374v1

Download annotations/find similar RTs

Seq: LPLV01000029.1 Burkholderia ubonensis strain MSMB785WGS MSMB785WGS_33, whole genome shotgun sequence (105233 bp)
Overview 1 RT 1: 45429-51653 bp Neighborhood of RT #1 [45429, 51829] MhpC Cytochrome_P460 RVT-Retrons AAA_21 AAA_21 DUF4148 Feature: gene Location: 45429-46469 bp Feature: domain Description: MhpC Location: 45591-46452 bp Feature: domain Description: MhpC Location: 45591 -46452 bp Feature: gene Location: 46469-47005 bp Feature: domain Description: Cytochrome_P460 Location: 46622-46991 bp Feature: domain Description: Cytochrome_P460 Location: 46622-46991 bp Feature: gene Location: 47688-48656 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47817-48375 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4781 7-48375 bp Feature: gene Location: 48653-49996 bp Feature: domain Description: AAA_21 Location: 48734-48884 bp Feature: domain Description: AAA_21 Location: 48734-48884 bp Feature: domain Description: AAA_21 Location: 49226-49397 bp Feature: domain Description: AAA_21 Location: 49226-49397 bp Feature: gene Location: 51491-51829 bp Feature: domain Description: DUF4148 Location: 51494-51653 bp Feature: domain Description: DUF41 48 Location: 51 494-51 653 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MhpC (COG0596), Cytochrome_P460 (pfam16694), RVT-Retrons, AAA_21 (pfam13304), DUF4148 (pfam13663)

Seq: LPLV01000021.1 Burkholderia ubonensis strain MSMB785WGS MSMB785WGS_26, whole genome shotgun sequence (240735 bp)
Overview 1 RT 1: 923-6944 bp Neighborhood of RT #1 [923, 6955] DUF3141 RVT-Retrons VOC AraC Feature: gene Location: 923-1135 bp Feature: gene Location: 1145-3403 bp Feature: domain Description: DUF3141 Location: 1271-3002 bp Feature: domain Description: DUF3141 Location: 12 71-3002 bp Feature: gene Location: 3652-5001 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4117-4753 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4117-4753 bp Feature: gene Location: 5304-5690 bp Feature: domain Description: VOC Location: 5319-5640 bp Feature: domain Description: VOC Location: 5319-5640 bp Feature: gene Location: 6128-6955 bp Feature: domain Description: AraC Location: 6590-6944 bp Feature: domain Description: AraC Location: 6590-6944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3141 (pfam11339), RVT-Retrons, VOC (cl14632), AraC (COG2207)

Seq: LPLV01000097.1 Burkholderia ubonensis strain MSMB785WGS MSMB785WGS_95, whole genome shotgun sequence (1520 bp)
Overview 1 RT 1: 1-1165 bp Neighborhood of RT #1 [1, 1166] RVT-GII GIIM Feature: gene Location: 1-1166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334-949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 4-949 bp Feature: domain Description: GIIM Note: maturase Location: 1006-1165 bp Feature: domain Description: GIIM Note: maturase Location: 1006-1165 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)