myRT

myRT report for GCA_001534005.1_ASM153400v1

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Seq: LPML01000185.1 Burkholderia ubonensis strain MSMB834WGS MSMB834WGS_266, whole genome shotgun sequence (34300 bp)
Overview 1 RT 1: 27294-33379 bp Neighborhood of RT #1 [27294, 33379] AraC VOC RVT-Retrons DUF3141 Feature: gene Location: 27294-28121 bp Ori: KWN95430.1 Feature: domain Description: AraC Location: 27756-28110 bp Feature: domain Description: AraC Location: 27756-281 1 0 bp Feature: gene Location: 28560-28946 bp Ori: KWN95431.1 Feature: domain Description: VOC Location: 28575-28896 bp Feature: domain Description: VOC Location: 28575-28896 bp Feature: gene Location: 29249-30598 bp Ori: KWN95432.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29714-30350 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2971 4-30350 bp Feature: gene Location: 30899-33157 bp Ori: KWN95433.1 Feature: domain Description: DUF3141 Location: 31025-32756 bp Feature: domain Description: DUF31 41 Location: 31 025-32756 bp Feature: gene Location: 33167-33379 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraC (COG2207), VOC (cl14632), RVT-Retrons, DUF3141 (pfam11339)

Seq: LPML01000300.1 Burkholderia ubonensis strain MSMB834WGS MSMB834WGS_66, whole genome shotgun sequence (83370 bp)
Overview 1 RT 1: 78754-82614 bp Neighborhood of RT #1 [78754, 82895] DUF4148 AAA_21 AAA_21 RVT-Retrons Feature: gene Location: 78754-79092 bp Ori: KWN81723.1 Feature: domain Description: DUF4148 Location: 78757-78916 bp Feature: domain Description: DUF4148 Location: 78757-78916 bp Feature: gene Location: 80587-81930 bp Ori: KWN81724.1 Feature: domain Description: AAA_21 Location: 80668-80818 bp Feature: domain Description: AAA_2 1 Location: 80668-80818 bp Feature: domain Description: AAA_21 Location: 81160-81331 bp Feature: domain Description: AAA_2 1 Location: 81160-81331 bp Feature: gene Location: 81927-82895 bp Ori: KWN81732.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 82056-82614 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 82 056-82 614 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4148 (pfam13663), AAA_21 (pfam13304), RVT-Retrons

Seq: LPML01000243.1 Burkholderia ubonensis strain MSMB834WGS MSMB834WGS_318, whole genome shotgun sequence (3347 bp)
Overview 1 RT 1: 497-3333 bp Neighborhood of RT #1 [497, 3347] DDE_Tnp_IS66_C RVT_N RVT-GII PRK14702 Feature: gene Location: 497-715 bp Ori: KWN87363.1 Feature: domain Description: DDE_Tnp_IS66_C Location: 566-680 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 566-680 bp Feature: gene Location: 1935-2930 bp Feature: domain Description: RVT_N Location: 2007-2250 bp Feature: domain Description: RVT_N Location: 2007-2250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2295-2931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2295-293 1 bp Feature: gene Location: 2967-3347 bp Feature: domain Description: PRK14702 Location: 2976-3333 bp Feature: domain Description: PRK14702 Location: 2976-3 3 3 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), RVT_N (pfam13655), RVT-GII, PRK14702 (insertion element IS2 transposase InsD; Provisional)

Seq: LPML01000268.1 Burkholderia ubonensis strain MSMB834WGS MSMB834WGS_37, whole genome shotgun sequence (1111 bp)
Overview 1 RT 1: 154-1102 bp Neighborhood of RT #1 [154, 1111] RVT-GII Feature: gene Location: 154-1111 bp Ori: KWN85177.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 487-1102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 87-1102 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: LPML01000275.1 Burkholderia ubonensis strain MSMB834WGS MSMB834WGS_43, whole genome shotgun sequence (4341 bp)
Overview 1 RT 1: 1-3522 bp Neighborhood of RT #1 [1, 4235] PRK14702 YhcG_C RVT-UG16 Feature: gene Location: 1-381 bp Feature: domain Description: PRK14702 Location: 10-367 bp Feature: domain Description: PRK14702 Location: 10-367 bp Feature: gene Location: 920-1471 bp Feature: domain Description: YhcG_C Location: 968-1418 bp Feature: domain Description: YhcG_C Location: 968-1418 bp Feature: gene Location: 2754-4235 bp Ori: KWN84465.1 Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 3114-3522 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 3114-35 22 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK14702 (insertion element IS2 transposase InsD; Provisional), YhcG_C, RVT-UG16