myRT

myRT report for GCA_001534135.1_ASM153413v1

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Seq: LPLF01000080.1 Burkholderia ubonensis strain MSMB742WGS MSMB742WGS_81, whole genome shotgun sequence (152310 bp)
Overview 1 RT 1: 149995-151691 bp Neighborhood of RT #1 [149995, 152296] CheX REC RVT-GII Feature: gene Location: 149995-150954 bp Feature: domain Description: CheX Location: 150511-150811 bp Feature: domain Description: CheX Location: 1 5051 1 -1 5081 1 bp Feature: gene Location: 150997-151362 bp Feature: domain Description: REC Location: 151012-151354 bp Feature: domain Description: REC Location: 1 51 01 2-1 51 354 bp Feature: gene Location: 151418-152296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 151436-151691 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 51 436-1 51 691 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CheX (pfam13690), REC (smart00448), RVT-GII

Seq: LPLF01000020.1 Burkholderia ubonensis strain MSMB742WGS MSMB742WGS_27, whole genome shotgun sequence (248038 bp)
Overview 1 RT 1: 147978-150777 bp Neighborhood of RT #1 [147978, 150800] RVT-DGRs Avd_like DUF1566 Feature: gene Location: 147978-148388 bp Feature: gene Location: 148390-148590 bp Feature: gene Location: 148587-149600 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 148677-149442 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 148677-149442 bp Feature: gene Location: 149923-150300 bp Feature: domain Description: Avd_like Location: 149950-150256 bp Feature: domain Description: Avd_like Location: 149950-1502 56 bp Feature: gene Location: 150315-150800 bp Feature: domain Description: DUF1566 Location: 150549-150777 bp Feature: domain Description: DUF1566 Location: 150549-150777 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)

Seq: LPLF01000005.1 Burkholderia ubonensis strain MSMB742WGS MSMB742WGS_13, whole genome shotgun sequence (63025 bp)
Overview 1 RT 1: 56041-62051 bp Neighborhood of RT #1 [56041, 62164] Cupin_6 AraC VOC RVT-Retrons DUF3141 PRK11890 Feature: gene Location: 56041-56868 bp Feature: domain Description: Cupin_6 Location: 56050-56509 bp Feature: domain Description: Cupin_6 Location: 56050-56509 bp Feature: domain Description: AraC Location: 56518-56857 bp Feature: domain Description: AraC Location: 56518-56857 bp Feature: gene Location: 57307-57693 bp Feature: domain Description: VOC Location: 57322-57643 bp Feature: domain Description: VOC Location: 573 22-57643 bp Feature: gene Location: 57996-59345 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 58461-59097 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 58461-59097 bp Feature: gene Location: 59594-61843 bp Feature: domain Description: DUF3141 Location: 59720-61451 bp Feature: domain Description: DUF3 141 Location: 59720-61451 bp Feature: gene Location: 61853-62164 bp Feature: domain Description: PRK11890 Location: 61859-62051 bp Feature: domain Description: PRK11890 Location: 61859-62051 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cupin_6 (pfam12852), AraC (COG2207), VOC (cl14632), RVT-Retrons, DUF3141 (pfam11339), PRK11890 (phosphate acetyltransferase; Provisional)