myRT

myRT report for GCA_001536865.1_ASM153686v1

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Seq: LPGJ01000130.1 Burkholderia ubonensis strain MSMB1562WGS MSMB1562WGS_8, whole genome shotgun sequence (1831 bp)
Overview 1 RT 1: 381-1602 bp Neighborhood of RT #1 [381, 1745] RVT-GII GIIM Feature: gene Location: 381-1745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 714-1329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 4-1 329 bp Feature: domain Description: GIIM Note: maturase Location: 1386-1602 bp Feature: domain Description: GIIM Note: maturase Location: 1 386-1 602 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LPGJ01000004.1 Burkholderia ubonensis strain MSMB1562WGS MSMB1562WGS_102, whole genome shotgun sequence (22418 bp)
Overview 1 RT 1: 11177-16699 bp Neighborhood of RT #1 [11177, 16845] AraC VOC RVT-Retrons COG3547 DDE_Tnp_Tn3 Feature: gene Location: 11177-12004 bp Feature: domain Description: AraC Location: 11639-11993 bp Feature: domain Description: AraC Location: 11639-11993 bp Feature: gene Location: 12443-12829 bp Feature: domain Description: VOC Location: 12458-12779 bp Feature: domain Description: VOC Location: 12 458-12 779 bp Feature: gene Location: 13132-14481 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13597-14233 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13597-142 33 bp Feature: gene Location: 14794-15924 bp Feature: domain Description: COG3547 Location: 14818-15784 bp Feature: domain Description: COG3547 Location: 14818-15784 bp Feature: gene Location: 16249-16845 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 16252-16699 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 162 52 -16699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraC (COG2207), VOC (cl14632), RVT-Retrons, COG3547 (Transposase ), DDE_Tnp_Tn3 (pfam01526)

Seq: LPGJ01000044.1 Burkholderia ubonensis strain MSMB1562WGS MSMB1562WGS_139, whole genome shotgun sequence (123954 bp)
Overview 1 RT 1: 73807-80190 bp Neighborhood of RT #1 [73807, 80207] DUF4148 AAA_21 AAA_21 RVT-Retrons Cytochrome_P460 MhpC Feature: gene Location: 73807-74145 bp Feature: domain Description: DUF4148 Location: 73810-73969 bp Feature: domain Description: DUF4148 Location: 73 810-73 969 bp Feature: gene Location: 75640-76983 bp Feature: domain Description: AAA_21 Location: 75721-75871 bp Feature: domain Description: AAA_21 Location: 75721-75871 bp Feature: domain Description: AAA_21 Location: 76213-76384 bp Feature: domain Description: AAA_21 Location: 76213 -763 84 bp Feature: gene Location: 76980-77948 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 77109-77667 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 77109-77667 bp Feature: gene Location: 78631-79167 bp Feature: domain Description: Cytochrome_P460 Location: 78784-79153 bp Feature: domain Description: Cytochrome_P460 Location: 78784-79153 bp Feature: gene Location: 79167-80207 bp Feature: domain Description: MhpC Location: 79329-80190 bp Feature: domain Description: MhpC Location: 793 29-80190 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4148 (pfam13663), AAA_21 (pfam13304), RVT-Retrons, Cytochrome_P460 (pfam16694), MhpC (COG0596)