myRT

myRT report for GCA_001541445.1_ASM154144v1

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Seq: LNCR01000016.1 Burkholderia cenocepacia strain CEIB S5-2 contig_14, whole genome shotgun sequence (201068 bp)
Overview 1 RT 1: 187404-193202 bp Neighborhood of RT #1 [187404, 193225] MarR Acetyltransf_1 Histone_HNS RVT-Retrons his_ut_repres HutH Feature: gene Location: 187404-188384 bp Feature: domain Description: MarR Location: 187527-187845 bp Feature: domain Description: MarR Location: 1 87527-1 87845 bp Feature: domain Description: Acetyltransf_1 Location: 187989-188298 bp Feature: domain Description: Acetyltransf_1 Location: 1 87989-1 88298 bp Feature: gene Location: 188594-188923 bp Feature: domain Description: Histone_HNS Location: 188615-188852 bp Feature: domain Description: Histone_HNS Location: 1 8861 5-1 88852 bp Feature: gene Location: 189249-190598 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 189714-190350 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 8971 4-1 90350 bp Feature: gene Location: 190926-191681 bp Feature: domain Description: his_ut_repres Location: 191004-191676 bp Feature: domain Description: his_ut_repres Location: 1 91 004-1 91 676 bp Feature: gene Location: 191732-193225 bp Feature: domain Description: HutH Location: 191744-193202 bp Feature: domain Description: HutH Location: 1 91 744-1 93202 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MarR (pfam01047), Acetyltransf_1 (pfam00583), Histone_HNS (pfam00816), RVT-Retrons, his_ut_repres (TIGR02018), HutH (COG2986)

Seq: LNCR01000077.1 Burkholderia cenocepacia strain CEIB S5-2 contig_7, whole genome shotgun sequence (270039 bp)
Overview 1 RT 1: 67677-73106 bp Neighborhood of RT #1 [67677, 73106] KOG2813 KOG2813 RVT-GII GIIM dsbG Feature: gene Location: 67677-68993 bp Feature: domain Description: KOG2813 Location: 68022-68121 bp Feature: domain Description: KOG2 813 Location: 6802 2 -6812 1 bp Feature: domain Description: KOG2813 Location: 68157-68310 bp Feature: domain Description: KOG2 813 Location: 68157-68310 bp Feature: gene Location: 69216-69515 bp Feature: gene Location: 69718-71088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70054-70669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70054-70669 bp Feature: domain Description: GIIM Note: maturase Location: 70729-70942 bp Feature: domain Description: GIIM Note: maturase Location: 7072 9-70942 bp Feature: gene Location: 71530-72273 bp Feature: domain Description: dsbG Location: 71536-72226 bp Feature: domain Description: dsbG Location: 71536-72 2 2 6 bp Feature: gene Location: 72699-73106 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG2813 (KOG2813, Predicted molecular chaperone, contains DnaJ domain ), RVT-GII, GIIM (pfam08388), dsbG (PRK11657)

Seq: LNCR01000042.1 Burkholderia cenocepacia strain CEIB S5-2 contig_38, whole genome shotgun sequence (72219 bp)
Overview 1 RT 1: 7819-12616 bp Neighborhood of RT #1 [7819, 12616] Dabb RVT-Retrons PRK15041 Feature: gene Location: 7819-8121 bp Feature: domain Description: Dabb Location: 7825-8116 bp Feature: domain Description: Dabb Location: 7825-8116 bp Feature: gene Location: 8350-10122 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8524-9133 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8524-913 3 bp Feature: gene Location: 10582-12306 bp Feature: domain Description: PRK15041 Location: 11122-12217 bp Feature: domain Description: PRK15041 Location: 11122-12217 bp Feature: gene Location: 12320-12616 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15041 (methyl-accepting chemotaxis protein), Dabb (smart00886), RVT-Retrons