myRT

myRT report for GCA_001542875.1_ASM154287v1

Download annotations/find similar RTs

Seq: LMAF01000002.1 Erythrobacter sp. YT30 contig00002, whole genome shotgun sequence (1911862 bp)
Overview 1 RT 1: 1344228-1351182 bp Neighborhood of RT #1 [1344228, 1351235] RMtype1_S_Sau1132ORF3780P-TRD2-CR2_like RMtype1_S_Sau1132ORF3780P-TRD2-CR2_like HsdM RVT-UNC Arm-DNA-bind_3 INT_Rci_Hp1_C Feature: gene Location: 1344228-1345337 bp Ori: KWV91747.1 Feature: domain Description: RMtype1_S_Sau1132ORF3780P-TRD2-CR2_like Location: 1344270-1344771 bp Feature: domain Description: RMtype1 _S_Sau1 1 32ORF3780P-TRD2-CR2_like Location: 1 344270-1 344771 bp Feature: domain Description: RMtype1_S_Sau1132ORF3780P-TRD2-CR2_like Location: 1344831-1345302 bp Feature: domain Description: RMtype1 _S_Sau1 1 32ORF3780P-TRD2-CR2_like Location: 1 344831 -1 345302 bp Feature: gene Location: 1345330-1347879 bp Ori: KWV91748.1 Feature: domain Description: HsdM Location: 1345342-1346692 bp Feature: domain Description: HsdM Location: 1 345342-1 346692 bp Feature: gene Location: 1348094-1349227 bp Ori: KWV91749.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 1348490-1349027 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1 348490-1 349027 bp Feature: gene Location: 1349471-1350100 bp Feature: gene Location: 1350102-1351235 bp Ori: KWV91751.1 Feature: domain Description: Arm-DNA-bind_3 Location: 1350120-1350381 bp Feature: domain Description: Arm-DNA-bind_3 Location: 1 3501 20-1 350381 bp Feature: domain Description: INT_Rci_Hp1_C Location: 1350699-1351182 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 1 350699-1 351 1 82 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_Sau1132ORF3780P-TRD2-CR2_like (cd17266), HsdM (COG0286), RVT-UG11/RVT-DGRs/RVT-CRISPR(RVT-UNC), Arm-DNA-bind_3 (pfam13356), INT_Rci_Hp1_C (cd00796)

Seq: LMAF01000001.1 Erythrobacter sp. YT30 contig00001, whole genome shotgun sequence (954729 bp)
Overview 1 RT 1: 827503-830383 bp Neighborhood of RT #1 [827503, 830383] CheY RVT-Retrons HTH_XRE Feature: gene Location: 827503-827928 bp Ori: KWV93271.1 Feature: domain Description: CheY Location: 827518-827854 bp Feature: domain Description: CheY Location: 82 7518-82 7854 bp Feature: gene Location: 828321-828626 bp Feature: gene Location: 828732-829496 bp Ori: KWV93273.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 828735-829242 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 82 8735-82 92 42 bp Feature: gene Location: 829630-829947 bp Ori: KWV93274.1 Feature: domain Description: HTH_XRE Location: 829645-829807 bp Feature: domain Description: HTH_XRE Location: 82 9645-82 9807 bp Feature: gene Location: 829985-830383 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CheY (COG0784), RVT-Retrons, HTH_XRE (smart00530)