myRT

myRT report for GCA_001543895.1_ASM154389v1

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Seq: JYIJ01000019.1 Streptomyces thermoautotrophicus strain UBT1 contig_1, whole genome shotgun sequence (1328556 bp)
Overview 1 RT 1: 422723-427555 bp 2 RT 2: 602064-605176 bp Neighborhood of RT #1 [422723, 427602] Transposase_mut RVT-GII GIIM DEXQc_UvrD Neighborhood of RT #2 [602064, 605190] YfmG RVT-CRISPR-like NrdG PTPS Feature: gene Location: 422723-423028 bp Ori: KWW97660.1 Feature: domain Description: Transposase_mut Location: 422816-422984 bp Feature: domain Description: Transposase_mut Location: 42281 6-422984 bp Feature: gene Location: 423050-424495 bp Ori: KWW97661.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 423374-424055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 423374-424055 bp Feature: domain Description: GIIM Note: maturase Location: 424130-424358 bp Feature: domain Description: GIIM Note: maturase Location: 4241 30-424358 bp Feature: gene Location: 426313-426822 bp Feature: gene Location: 427342-427602 bp Ori: KWW97663.1 Feature: domain Description: DEXQc_UvrD Location: 427369-427555 bp Feature: domain Description: DEXQc_UvrD Location: 427369-427555 bp Feature: gene Location: 602064-602519 bp Feature: gene Location: 602516-603055 bp Ori: KWW97747.1 Feature: domain Description: YfmG Location: 602627-603050 bp Feature: domain Description: YfmG Location: 602627-603050 bp Feature: gene Location: 603130-603912 bp Ori: KWW97748.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 603358-603871 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 603358-603871 bp Feature: gene Location: 604064-604780 bp Ori: KWW98256.1 Feature: domain Description: NrdG Location: 604106-604763 bp Feature: domain Description: NrdG Location: 6041 06-604763 bp Feature: gene Location: 604795-605190 bp Ori: KWW97749.1 Feature: domain Description: PTPS Location: 604825-605176 bp Feature: domain Description: PTPS Location: 604825-6051 76 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_mut (pfam00872), RVT-GII, GIIM (pfam08388), DEXQc_UvrD (cd17932), YfmG (COG1262), RVT-CRISPR, NrdG (TIGR02491), PTPS (pfam01242)