myRT

myRT report for GCA_001543915.1_ASM154391v1

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Seq: JYIK01001109.1 Streptomyces thermoautotrophicus strain UBT1 contig00016, whole genome shotgun sequence (20224 bp)
Overview 1 RT 1: 1543-4655 bp Neighborhood of RT #1 [1543, 4669] YfmG RVT-CRISPR-like NrdG PTPS Feature: gene Location: 1543-1998 bp Feature: gene Location: 1995-2534 bp Ori: KWX06244.1 Feature: domain Description: YfmG Location: 2106-2529 bp Feature: domain Description: YfmG Location: 21 06-2529 bp Feature: gene Location: 2609-3391 bp Ori: KWX06235.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2837-3350 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2837-3350 bp Feature: gene Location: 3543-4259 bp Ori: KWX06245.1 Feature: domain Description: NrdG Location: 3585-4242 bp Feature: domain Description: NrdG Location: 3585-4242 bp Feature: gene Location: 4274-4669 bp Ori: KWX06236.1 Feature: domain Description: PTPS Location: 4304-4655 bp Feature: domain Description: PTPS Location: 4304-4655 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), RVT-CRISPR, NrdG (TIGR02491), PTPS (pfam01242)

Seq: JYIK01000762.1 Streptomyces thermoautotrophicus strain UBT1 contig00363, whole genome shotgun sequence (4387 bp)
Overview 1 RT 1: 2177-4356 bp Neighborhood of RT #1 [2177, 4387] RVT-GII GIIM Transposase_mut DDE_5 Feature: gene Location: 2177-3622 bp Ori: KWX09637.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2501-3182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 501-3182 bp Feature: domain Description: GIIM Note: maturase Location: 3257-3485 bp Feature: domain Description: GIIM Note: maturase Location: 32 57-3485 bp Feature: gene Location: 3644-3949 bp Ori: KWX09638.1 Feature: domain Description: Transposase_mut Location: 3737-3905 bp Feature: domain Description: Transposase_mut Location: 3737-3905 bp Feature: gene Location: 4032-4387 bp Ori: KWX09639.1 Feature: domain Description: DDE_5 Location: 4101-4356 bp Feature: domain Description: DDE_5 Location: 4101-4356 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Transposase_mut (pfam00872), DDE_5 (pfam13546)