myRT

myRT report for GCA_001544075.1_ASM154407v1

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Seq: BCNT01000012.1 Comamonas terrae DNA, contig: CT1_CON0011_0001, strain: NBRC 106524, whole genome shotgun sequence (117879 bp)
Overview 1 RT 1: 48037-55073 bp Neighborhood of RT #1 [48037, 55075] rpmE2 RVT_N RVT-GII GIIM HNH Rho trxA Feature: gene Location: 48037-49767 bp Feature: gene Location: 49959-50204 bp Feature: domain Description: rpmE2 Location: 49962-50202 bp Feature: domain Description: rpmE2 Location: 49962-50202 bp Feature: gene Location: 50402-52129 bp Feature: RT Description: RVT_N Location: 50459-50702 bp Feature: RT Description: RVT_N Location: 50459-50702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50750-51398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50750-51 398 bp Feature: domain Description: GIIM Note: maturase Location: 51449-51683 bp Feature: domain Description: GIIM Note: maturase Location: 51 449-51 683 bp Feature: domain Description: HNH Note: nucleases Location: 51929-52064 bp Feature: domain Description: HNH Note: nucleases Location: 51 929-52064 bp Feature: gene Location: 53199-54461 bp Feature: domain Description: Rho Location: 53202-54453 bp Feature: domain Description: Rho Location: 53202-54453 bp Feature: gene Location: 54743-55075 bp Feature: domain Description: trxA Location: 54752-55073 bp Feature: domain Description: trxA Location: 54752-55073 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpmE2 (PRK01678), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), Rho (COG1158), trxA (PRK09381)

Seq: BCNT01000017.1 Comamonas terrae DNA, contig: CT1_CON0016_0001, strain: NBRC 106524, whole genome shotgun sequence (93003 bp)
Overview 1 RT 1: 85717-88833 bp Neighborhood of RT #1 [85717, 88925] DUF1566 RVT-DGRs Dam Feature: gene Location: 85717-85953 bp Feature: gene Location: 85983-86591 bp Feature: domain Description: DUF1566 Location: 86250-86577 bp Feature: domain Description: DUF1566 Location: 862 50-86577 bp Feature: gene Location: 86726-87601 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 86729-87434 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8672 9-87434 bp Feature: gene Location: 87658-88020 bp Feature: gene Location: 88074-88925 bp Feature: domain Description: Dam Location: 88092-88833 bp Feature: domain Description: Dam Location: 88092 -88833 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), RVT-DGRs, Dam (pfam05869)