myRT

myRT report for GCA_001544515.2_ASM1544515v2

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Seq: FCOL02000026.1 Burkholderia terrestris isolate LMG 22937 genome assembly, contig: contig000026, whole genome shotgun sequence (86168 bp)
Overview 1 RT 1: 66390-72615 bp Neighborhood of RT #1 [66390, 72653] nrdR glyA RVT_N RVT-GII GIIM HNH PRK10538 thio_ybgC Feature: gene Location: 66390-66872 bp Ori: SAL71934.1 Feature: domain Description: nrdR Location: 66393-66837 bp Feature: domain Description: nrdR Location: 66393-66837 bp Feature: gene Location: 66879-68126 bp Ori: SAL71937.1 Feature: domain Description: glyA Location: 66897-68121 bp Feature: domain Description: glyA Location: 66897-681 21 bp Feature: gene Location: 68489-70189 bp Ori: SAL71944.1 Feature: domain Description: RVT_N Location: 68546-68789 bp Feature: domain Description: RVT_N Location: 68546-68789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68834-69482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68834-69482 bp Feature: domain Description: GIIM Note: maturase Location: 69536-69767 bp Feature: domain Description: GIIM Note: maturase Location: 69536-69767 bp Feature: domain Description: HNH Note: nucleases Location: 70019-70154 bp Feature: domain Description: HNH Note: nucleases Location: 7001 9-701 54 bp Feature: gene Location: 71378-72124 bp Ori: SAL71950.1 Feature: domain Description: PRK10538 Location: 71381-72119 bp Feature: domain Description: PRK1 0538 Location: 71 381 -721 1 9 bp Feature: gene Location: 72177-72653 bp Ori: SAL71955.1 Feature: domain Description: thio_ybgC Location: 72246-72615 bp Feature: domain Description: thio_ybgC Location: 72246-7261 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nrdR (PRK00464), glyA (PRK00011), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PRK10538 (bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG), thio_ybgC (TIGR02799)

Seq: FCOL02000107.1 Burkholderia terrestris isolate LMG 22937 genome assembly, contig: contig000107, whole genome shotgun sequence (10578 bp)
Overview 1 RT 1: 3049-9343 bp Neighborhood of RT #1 [3049, 10182] RVT-UG12 Feature: gene Location: 3049-3180 bp Feature: gene Location: 3911-7525 bp Feature: gene Location: 8557-10182 bp Ori: SAL83856.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 8893-9343 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 8893-9343 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG12

Seq: FCOL02000450.1 Burkholderia terrestris isolate LMG 22937 genome assembly, contig: contig000450, whole genome shotgun sequence (1211 bp)
Overview 1 RT 1: 24-1136 bp Neighborhood of RT #1 [24, 1136] RVT-GII Feature: gene Location: 24-452 bp Ori: SAL88265.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39-402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 9-402 bp Feature: gene Location: 804-1136 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FCOL02000517.1 Burkholderia terrestris isolate LMG 22937 genome assembly, contig: contig000517, whole genome shotgun sequence (915 bp)
Overview 1 RT 1: 189-726 bp Neighborhood of RT #1 [189, 908] RVT-GII GIIM Feature: gene Location: 189-908 bp Ori: SAL88600.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 192-441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 192-4 4 1 bp Feature: domain Description: GIIM Note: maturase Location: 492-726 bp Feature: domain Description: GIIM Note: maturase Location: 4 92-726 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: FCOL02000202.1 Burkholderia terrestris isolate LMG 22937 genome assembly, contig: contig000202, whole genome shotgun sequence (3448 bp)
Overview 1 RT 1: 172-2668 bp Neighborhood of RT #1 [172, 2679] RVT-GII Feature: gene Location: 172-783 bp Feature: gene Location: 2047-2679 bp Ori: SAL85903.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2275-2668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2275 -2668 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: FCOL02000315.1 Burkholderia terrestris isolate LMG 22937 genome assembly, contig: contig000315, whole genome shotgun sequence (1973 bp)
Overview 1 RT 1: 166-1405 bp Neighborhood of RT #1 [166, 1476] RVT-GII GIIM Feature: gene Location: 166-1476 bp Ori: SAL87251.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 457-1120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 457-1120 bp Feature: domain Description: GIIM Note: maturase Location: 1189-1405 bp Feature: domain Description: GIIM Note: maturase Location: 1189-1405 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)