myRT

myRT report for GCA_001544595.2_ASM154459v2

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Seq: FCOH02000031.1 Burkholderia peredens type strain LMG 29314 genome assembly, contig: contig000031, whole genome shotgun sequence (67661 bp)
Overview 1 RT 1: 4487-10707 bp Neighborhood of RT #1 [4487, 10707] Dabb RVT-Retrons PRK15041 Feature: gene Location: 4487-5176 bp Feature: gene Location: 5910-6212 bp Ori: SAL77556.1 Feature: domain Description: Dabb Location: 5916-6207 bp Feature: domain Description: Dabb Location: 591 6-6207 bp Feature: gene Location: 6441-8213 bp Ori: SAL77560.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6615-7224 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 661 5-7224 bp Feature: gene Location: 8673-10397 bp Ori: SAL77563.1 Feature: domain Description: PRK15041 Location: 9213-10308 bp Feature: domain Description: PRK1 5041 Location: 921 3-1 0308 bp Feature: gene Location: 10411-10707 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dabb (smart00886), RVT-Retrons, PRK15041 (methyl-accepting chemotaxis protein)

Seq: FCOH02000009.1 Burkholderia peredens type strain LMG 29314 genome assembly, contig: contig000009, whole genome shotgun sequence (236948 bp)
Overview 1 RT 1: 119307-124971 bp Neighborhood of RT #1 [119307, 124971] RVT-UG15 Feature: gene Location: 119307-120221 bp Feature: gene Location: 120535-120930 bp Feature: gene Location: 121306-122961 bp Ori: SAL53548.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 121720-122134 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 12 172 0-12 2 134 bp Feature: gene Location: 122984-123253 bp Feature: gene Location: 123532-124971 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG15

Seq: FCOH02000003.1 Burkholderia peredens type strain LMG 29314 genome assembly, contig: contig000003, whole genome shotgun sequence (379560 bp)
Overview 1 RT 1: 195112-203101 bp Neighborhood of RT #1 [195112, 203505] motB RVT-UG12 rimI PIN_GNAT-like EVE AbiTii Feature: gene Location: 195112-196092 bp Ori: SAL22534.1 Feature: domain Description: motB Location: 195160-196042 bp Feature: domain Description: motB Location: 195160-196042 bp Feature: gene Location: 196377-196982 bp Feature: gene Location: 197024-198214 bp Ori: SAL22557.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 197045-197483 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 197045-197483 bp Feature: gene Location: 199076-201238 bp Ori: SAL22578.1 Feature: domain Description: rimI Location: 199199-199493 bp Feature: domain Description: rimI Location: 199199-199493 bp Feature: domain Description: PIN_GNAT-like Location: 199643-200060 bp Feature: domain Description: PIN_GNAT-like Location: 199643 -200060 bp Feature: domain Description: EVE Location: 200888-201212 bp Feature: domain Description: EVE Location: 200888-201212 bp Feature: gene Location: 202564-203505 bp Ori: SAL22587.1 Feature: domain Description: AbiTii Location: 202600-203101 bp Feature: domain Description: AbiTii Location: 202600-203 101 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT motB (PRK12799), RVT-UG12, rimI (TIGR01575), PIN_GNAT-like (cd18700), EVE (pfam01878), AbiTii (pfam18864)