myRT

myRT report for GCA_001544755.2_ASM154475v2

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Seq: FCOF02000067.1 Burkholderia catudaia type strain LMG 29318 genome assembly, contig: contig000067, whole genome shotgun sequence (21462 bp)
Overview 1 RT 1: 194-3825 bp Neighborhood of RT #1 [194, 3825] Resolvase Recombinase Zn_ribbon_recom RVT-GII GIIM Dimer_Tnp_Tn5 Feature: gene Location: 194-343 bp Feature: gene Location: 592-2442 bp Ori: SAK93787.1 Feature: domain Description: Resolvase Location: 670-1111 bp Feature: domain Description: Resolvase Location: 670-1 1 1 1 bp Feature: domain Description: Recombinase Location: 1198-1561 bp Feature: domain Description: Recombinase Location: 1 1 98-1 561 bp Feature: domain Description: Zn_ribbon_recom Location: 1600-1789 bp Feature: domain Description: Zn_ribbon_recom Location: 1 600-1 789 bp Feature: gene Location: 2420-2995 bp Ori: SAK93792.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2426-2609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2426-2609 bp Feature: domain Description: GIIM Note: maturase Location: 2684-2912 bp Feature: domain Description: GIIM Note: maturase Location: 2684-291 2 bp Feature: gene Location: 3326-3529 bp Ori: SAK93795.1 Feature: domain Description: Dimer_Tnp_Tn5 Location: 3350-3521 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 3350-3521 bp Feature: gene Location: 3673-3825 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-GII, GIIM (pfam08388), Dimer_Tnp_Tn5 (pfam02281)

Seq: FCOF02000032.1 Burkholderia catudaia type strain LMG 29318 genome assembly, contig: contig000032, whole genome shotgun sequence (74389 bp)
Overview 1 RT 1: 71190-74288 bp Neighborhood of RT #1 [71190, 74368] PRK06247 zf-ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 RVT-GII GIIM Feature: gene Location: 71190-72167 bp Ori: SAK82458.1 Feature: domain Description: PRK06247 Location: 71196-72162 bp Feature: domain Description: PRK062 47 Location: 71196-72 162 bp Feature: gene Location: 72327-73571 bp Ori: SAK82470.1 Feature: domain Description: zf-ISL3 Location: 72504-72588 bp Feature: domain Description: zf-ISL3 Location: 72 504-72 588 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 72624-72765 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 72 62 4-72 765 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 72810-73512 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 72 810-73512 bp Feature: gene Location: 73655-74368 bp Ori: SAK82477.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73661-73985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73661-73985 bp Feature: domain Description: GIIM Note: maturase Location: 74066-74288 bp Feature: domain Description: GIIM Note: maturase Location: 74066-742 88 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06247 (pyruvate kinase; Provisional), zf-ISL3 (pfam14690), HTH_Tnp_ISL3 (pfam13542), DDE_Tnp_ISL3 (pfam01610), RVT-GII, GIIM (pfam08388)

Seq: FCOF02000058.1 Burkholderia catudaia type strain LMG 29318 genome assembly, contig: contig000058, whole genome shotgun sequence (33455 bp)
Overview 1 RT 1: 687-2597 bp Neighborhood of RT #1 [687, 2597] RVT_N RVT-GII PLN02911 Feature: gene Location: 687-1433 bp Ori: SAK91877.1 Feature: domain Description: RVT_N Location: 750-987 bp Feature: domain Description: RVT_N Location: 750-987 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1038-1266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103 8-1266 bp Feature: gene Location: 1427-2197 bp Ori: SAK91882.1 Feature: domain Description: PLN02911 Location: 1454-2168 bp Feature: domain Description: PLN02911 Location: 1454-2168 bp Feature: gene Location: 2415-2597 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, PLN02911 (inositol-phosphate phosphatase)