myRT

myRT report for GCA_001548535.1_ASM154853v1

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Seq: LDWV01000068.1 Klebsiella pneumoniae strain YMC 2013/7/B3993 c68, whole genome shotgun sequence (10847 bp)
Overview 1 RT 1: 6358-10315 bp Neighborhood of RT #1 [6358, 10707] Phage_GPA RVT-GII Feature: gene Location: 6358-8742 bp Feature: domain Description: Phage_GPA Location: 6922-7888 bp Feature: domain Description: Phage_GPA Location: 6922-7888 bp Feature: gene Location: 9391-9585 bp Feature: gene Location: 9697-10707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9703-10315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9703-1 031 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_GPA (pfam05840), RVT-GII

Seq: LDWV01000012.1 Klebsiella pneumoniae strain YMC 2013/7/B3993 c12, whole genome shotgun sequence (65401 bp)
Overview 1 RT 1: 1-3684 bp Neighborhood of RT #1 [1, 3698] RVT-GII PRK10016 YccC Feature: gene Location: 1-93 bp Feature: gene Location: 502-1986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 904-1594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 904-1594 bp Feature: gene Location: 2068-2541 bp Feature: domain Description: PRK10016 Location: 2071-2530 bp Feature: domain Description: PRK10016 Location: 2 071-2 530 bp Feature: gene Location: 2640-3698 bp Feature: domain Description: YccC Location: 2646-3684 bp Feature: domain Description: YccC Location: 2 646-3684 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), RVT-GII

Seq: LDWV01000080.1 Klebsiella pneumoniae strain YMC 2013/7/B3993 c80, whole genome shotgun sequence (27391 bp)
Overview 1 RT 1: 6439-10002 bp Neighborhood of RT #1 [6439, 10002] PRK10276 RVT-GII PRK10597 Feature: gene Location: 6439-6864 bp Feature: domain Description: PRK10276 Location: 6442-6850 bp Feature: domain Description: PRK10276 Location: 6442-6850 bp Feature: gene Location: 7438-7632 bp Feature: gene Location: 7744-8754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7750-8362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7750-83 62 bp Feature: gene Location: 8833-9066 bp Feature: domain Description: PRK10597 Location: 8836-9061 bp Feature: domain Description: PRK10597 Location: 883 6-9061 bp Feature: gene Location: 9799-10002 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, PRK10597 (DNA damage-inducible protein I; Provisional)

Seq: LDWV01000029.1 Klebsiella pneumoniae strain YMC 2013/7/B3993 c29, whole genome shotgun sequence (116425 bp)
Overview 1 RT 1: 35228-40531 bp Neighborhood of RT #1 [35228, 40536] SbcB dacD RVT-GII DinI Feature: gene Location: 35228-36652 bp Feature: domain Description: SbcB Location: 35234-36650 bp Feature: domain Description: SbcB Location: 35234 -36650 bp Feature: gene Location: 36833-37996 bp Feature: domain Description: dacD Location: 36836-37991 bp Feature: domain Description: dacD Location: 36836-37991 bp Feature: gene Location: 38519-40003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38921-39611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38921-39611 bp Feature: gene Location: 40104-40292 bp Feature: gene Location: 40303-40536 bp Feature: domain Description: DinI Location: 40345-40531 bp Feature: domain Description: DinI Location: 4 034 5-4 0531 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcB (COG2925), dacD (PRK11397), RVT-GII, DinI (pfam06183)

Seq: LDWV01000184.1 Klebsiella pneumoniae strain YMC 2013/7/B3993 rep_c184, whole genome shotgun sequence (899 bp)
Overview 1 RT 1: 1-547 bp Neighborhood of RT #1 [1, 899] RVT-GII Feature: gene Location: 1-899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-5 47 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: LDWV01000003.1 Klebsiella pneumoniae strain YMC 2013/7/B3993 c3, whole genome shotgun sequence (56180 bp)
Overview 1 RT 1: 221-2554 bp Neighborhood of RT #1 [221, 2565] RVT-GII DinI Feature: gene Location: 221-1231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227-839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 227-839 bp Feature: gene Location: 1343-1537 bp Feature: gene Location: 2323-2565 bp Feature: domain Description: DinI Location: 2374-2554 bp Feature: domain Description: DinI Location: 2374-2554 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DinI (pfam06183)

Seq: LDWV01000081.1 Klebsiella pneumoniae strain YMC 2013/7/B3993 c81, whole genome shotgun sequence (7334 bp)
Overview 1 RT 1: 184-3425 bp Neighborhood of RT #1 [184, 3562] RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 184-1668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586-1276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586-127 6 bp Feature: gene Location: 1917-2888 bp Feature: domain Description: StbA Location: 1920-2865 bp Feature: domain Description: StbA Location: 1920-2865 bp Feature: gene Location: 2891-3562 bp Feature: domain Description: Plasmid_stab_B Location: 2906-3113 bp Feature: domain Description: Plasmid_stab_B Location: 2906-3113 bp Feature: domain Description: Plasmid_stab_B Location: 3218-3425 bp Feature: domain Description: Plasmid_stab_B Location: 3218-3425 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)