myRT

myRT report for GCA_001549975.1_ASM154997v1

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Seq: LROX01000002.1 Klebsiella variicola strain GPKP contig2, whole genome shotgun sequence (646912 bp)
Overview 1 RT 1: 617914-621406 bp Neighborhood of RT #1 [617914, 621411] HTH_XRE RVT-Retrons SmpB PRK10724 Feature: gene Location: 617914-618240 bp Feature: gene Location: 618292-618582 bp Feature: domain Description: HTH_XRE Location: 618304-618469 bp Feature: domain Description: HTH_XRE Location: 61 8304-61 8469 bp Feature: gene Location: 618617-619534 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 618713-619280 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61 871 3-61 9280 bp Feature: gene Location: 620342-620824 bp Feature: domain Description: SmpB Location: 620372-620816 bp Feature: domain Description: SmpB Location: 620372-62081 6 bp Feature: gene Location: 620974-621411 bp Feature: domain Description: PRK10724 Location: 620977-621406 bp Feature: domain Description: PRK1 0724 Location: 620977-621 406 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)

Seq: LROX01000045.1 Klebsiella variicola strain GPKP contig45, whole genome shotgun sequence (2327 bp)
Overview 1 RT 1: 95-2283 bp Neighborhood of RT #1 [95, 2283] RVT-GII GIIM Feature: gene Location: 95-1618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 368-1100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 368-1100 bp Feature: domain Description: GIIM Note: maturase Location: 1214-1397 bp Feature: domain Description: GIIM Note: maturase Location: 12 14-1397 bp Feature: gene Location: 1689-1997 bp Feature: gene Location: 2032-2283 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)