myRT

myRT report for GCA_001550225.1_ASM155022v1

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Seq: LRQX01001712.1 Streptomyces scabiei strain 95-18 9518_1712.1, whole genome shotgun sequence (37069 bp)
Overview 1 RT 1: 13498-18790 bp Neighborhood of RT #1 [13498, 19026] ExeA Mu-transpos_C RVT-GII Intron_maturas2 HNHc HTH_32 rve HTH_23 Feature: gene Location: 13498-14271 bp Feature: domain Description: ExeA Location: 13501-14242 bp Feature: domain Description: ExeA Location: 1 3501 -1 4242 bp Feature: gene Location: 14534-15190 bp Feature: domain Description: Mu-transpos_C Location: 14810-14963 bp Feature: domain Description: Mu-transpos_C Location: 1 481 0-1 4963 bp Feature: gene Location: 15223-17013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15484-16282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5484-1 6282 bp Feature: domain Description: Intron_maturas2 Location: 16408-16645 bp Feature: domain Description: Intron_maturas2 Location: 1 6408-1 6645 bp Feature: domain Description: HNHc Note: nucleases Location: 16816-16969 bp Feature: domain Description: HNHc Note: nucleases Location: 1 681 6-1 6969 bp Feature: gene Location: 17509-18342 bp Feature: domain Description: HTH_32 Location: 17704-17917 bp Feature: domain Description: HTH_32 Location: 1 7704-1 791 7 bp Feature: domain Description: rve Location: 17986-18307 bp Feature: domain Description: rve Location: 1 7986-1 8307 bp Feature: gene Location: 18442-19026 bp Feature: domain Description: HTH_23 Location: 18700-18790 bp Feature: domain Description: HTH_23 Location: 1 8700-1 8790 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ExeA (COG3267), Mu-transpos_C (pfam09299), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), HTH_32 (pfam13565), rve (pfam00665), HTH_23 (pfam13384)