myRT

myRT report for GCA_001552155.1_ASM155215v1

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Seq: BCQQ01000117.1 Actinomadura formosensis NBRC 14204 DNA, contig: AF1_CON0117_0001, whole genome shotgun sequence (22430 bp)
Overview 1 RT 1: 13678-19129 bp Neighborhood of RT #1 [13678, 19275] Amino_oxidase RVT-GII GIIM DDE_Tnp_4 Feature: gene Location: 13678-13878 bp Feature: gene Location: 13964-15277 bp Feature: domain Description: Amino_oxidase Location: 14009-15254 bp Feature: domain Description: Amino_oxidase Location: 1 4009-1 5254 bp Feature: gene Location: 16317-17315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16323-16884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6323-1 6884 bp Feature: domain Description: GIIM Note: maturase Location: 16971-17187 bp Feature: domain Description: GIIM Note: maturase Location: 1 6971 -1 71 87 bp Feature: gene Location: 17381-17707 bp Feature: gene Location: 18634-19275 bp Feature: domain Description: DDE_Tnp_4 Location: 18928-19129 bp Feature: domain Description: DDE_Tnp_4 Location: 1 8928-1 91 29 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Amino_oxidase (pfam01593), RVT-GII, GIIM (pfam08388), DDE_Tnp_4 (pfam13359)

Seq: BCQQ01000128.1 Actinomadura formosensis NBRC 14204 DNA, contig: AF1_CON0128_0001, whole genome shotgun sequence (20362 bp)
Overview 1 RT 1: 8624-12606 bp Neighborhood of RT #1 [8624, 12644] Acetyltransf_1 RVT-GII DDE_Tnp_1_assoc DDE_Tnp_1 CitB Feature: gene Location: 8624-8851 bp Feature: domain Description: Acetyltransf_1 Location: 8666-8777 bp Feature: domain Description: Acetyltransf_1 Location: 8666-8777 bp Feature: gene Location: 8988-9320 bp Feature: gene Location: 9858-10283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10122-10266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1012 2 -102 66 bp Feature: gene Location: 10369-11526 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 10465-10723 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 10465-1072 3 bp Feature: domain Description: DDE_Tnp_1 Location: 10750-11431 bp Feature: domain Description: DDE_Tnp_1 Location: 10750-11431 bp Feature: gene Location: 11970-12644 bp Feature: domain Description: CitB Location: 11997-12606 bp Feature: domain Description: CitB Location: 11997-12 606 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_1 (pfam00583), RVT-GII, DDE_Tnp_1_assoc (pfam13808), DDE_Tnp_1 (pfam01609), CitB (TIGR02484)