myRT

myRT report for GCA_001552295.1_ASM155229v1

Download annotations/find similar RTs

Seq: BCQX01000028.1 Globicatella sanguinis NBRC 15551 DNA, contig: GSA01S_CON0028_0001, whole genome shotgun sequence (20618 bp)
Overview 1 RT 1: 8378-14783 bp Neighborhood of RT #1 [8378, 14783] Mrr PRK00420 PRK00420 RVT-AbiA HEPN_AbiA_CTD M20_peptT Feature: gene Location: 8378-9304 bp Feature: domain Description: Mrr Location: 8579-9284 bp Feature: domain Description: Mrr Location: 8579-9284 bp Feature: gene Location: 9529-10497 bp Feature: domain Description: PRK00420 Location: 9673-9835 bp Feature: domain Description: PRK00420 Location: 9673-9835 bp Feature: domain Description: PRK00420 Location: 9928-10168 bp Feature: domain Description: PRK00420 Location: 9928-1 01 68 bp Feature: gene Location: 10878-12656 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 11157-11643 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 1 1 1 57-1 1 643 bp Feature: domain Description: HEPN_AbiA_CTD Location: 12267-12639 bp Feature: domain Description: HEPN_AbiA_CTD Location: 1 2267-1 2639 bp Feature: gene Location: 13055-14296 bp Feature: domain Description: M20_peptT Location: 13073-14273 bp Feature: domain Description: M20_peptT Location: 1 3073-1 4273 bp Feature: gene Location: 14313-14783 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mrr (COG1715), PRK00420 (hypothetical protein; Validated), RVT-AbiA, HEPN_AbiA_CTD (pfam18732), M20_peptT (cd03892)

Seq: BCQX01000211.1 Globicatella sanguinis NBRC 15551 DNA, contig: GSA01S_CON0216_0001, whole genome shotgun sequence (1498 bp)
Overview 1 RT 1: 50-1316 bp Neighborhood of RT #1 [50, 1495] RVT-GII GIIM Feature: gene Location: 50-1495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 425-1040 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 5-1040 bp Feature: domain Description: GIIM Note: maturase Location: 1097-1316 bp Feature: domain Description: GIIM Note: maturase Location: 1097-1316 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: BCQX01000217.1 Globicatella sanguinis NBRC 15551 DNA, contig: GSA01S_CON0222_0001, whole genome shotgun sequence (1359 bp)
Overview 1 RT 1: 3-1101 bp Neighborhood of RT #1 [3, 1256] RVT-GII GIIM Feature: gene Location: 3-1256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-822 bp Feature: domain Description: GIIM Note: maturase Location: 882-1101 bp Feature: domain Description: GIIM Note: maturase Location: 882-1101 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)