myRT

myRT report for GCA_001553225.1_ASM155322v1

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Seq: KQ960539.1 Prevotella amnii strain DNF00307 genomic scaffold Scaffold257, whole genome shotgun sequence (49335 bp)
Overview 1 RT 1: 35994-43389 bp Neighborhood of RT #1 [35994, 43389] N6_Mtase DUF2958 COG4646 matK RVT-GII Intron_maturas2 COG4646 Feature: gene Location: 35994-39608 bp Feature: domain Description: N6_Mtase Location: 36306-36900 bp Feature: domain Description: N6_Mtase Location: 36306-36900 bp Feature: domain Description: DUF2958 Location: 37374-37629 bp Feature: domain Description: DUF2958 Location: 37374-37629 bp Feature: domain Description: COG4646 Location: 38667-39597 bp Feature: domain Description: COG4646 Location: 38667-39597 bp Feature: gene Location: 39699-40055 bp Feature: gene Location: 40161-41963 bp Feature: domain Description: matK Location: 40230-40317 bp Feature: domain Description: matK Location: 40230-4031 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40425-41247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40425-41 247 bp Feature: domain Description: Intron_maturas2 Location: 41397-41631 bp Feature: domain Description: Intron_maturas2 Location: 41 397-41 631 bp Feature: gene Location: 41950-43203 bp Feature: domain Description: COG4646 Location: 42064-42988 bp Feature: domain Description: COG4646 Location: 42064-42988 bp Feature: gene Location: 43204-43389 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), DUF2958 (pfam11171), COG4646 (Adenine-specific DNA methylase, N12 class ), matK (CHL00002), RVT-GII, Intron_maturas2 (pfam01348)

Seq: KQ960540.1 Prevotella amnii strain DNF00307 genomic scaffold Scaffold267, whole genome shotgun sequence (9526 bp)
Overview 1 RT 1: 3574-7026 bp Neighborhood of RT #1 [3574, 7058] RVT-GII GIIM HTH_17 HTH_17 Feature: gene Location: 3574-3762 bp Feature: gene Location: 3929-4066 bp Feature: gene Location: 4140-5546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4482-5100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4482 -5100 bp Feature: domain Description: GIIM Note: maturase Location: 5154-5358 bp Feature: domain Description: GIIM Note: maturase Location: 5154-5358 bp Feature: gene Location: 6457-6726 bp Feature: domain Description: HTH_17 Location: 6571-6718 bp Feature: domain Description: HTH_17 Location: 6571-6718 bp Feature: gene Location: 6747-7058 bp Feature: domain Description: HTH_17 Location: 6879-7026 bp Feature: domain Description: HTH_17 Location: 6879-702 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HTH_17 (pfam12728)