myRT

myRT report for GCA_001557005.1_ASM155700v1

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Seq: LSKG01000129.1 Sphingomonas sp. CCH15-F11 CCH15-F1_contig144, whole genome shotgun sequence (33831 bp)
Overview 1 RT 1: 24782-29011 bp Neighborhood of RT #1 [24782, 30714] COG5489 Hypoth_Ymh RVT-Retrons ParB_N_like Feature: gene Location: 24782-25258 bp Feature: domain Description: COG5489 Location: 24962-25256 bp Feature: domain Description: COG5489 Location: 24962-25256 bp Feature: gene Location: 25402-26271 bp Feature: domain Description: Hypoth_Ymh Location: 25882-26242 bp Feature: domain Description: Hypoth_Ymh Location: 25882-26242 bp Feature: gene Location: 26277-28019 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 26412-27042 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2641 2-27042 bp Feature: gene Location: 28327-28551 bp Feature: gene Location: 28645-30714 bp Feature: domain Description: ParB_N_like Location: 28762-29011 bp Feature: domain Description: ParB_N_like Location: 28762-2901 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5489 (Uncharacterized conserved protein, DUF736 family ), Hypoth_Ymh (pfam09509), RVT-Retrons, ParB_N_like (cd16411)

Seq: LSKG01000159.1 Sphingomonas sp. CCH15-F11 CCH15-F1_contig178, whole genome shotgun sequence (2561 bp)
Overview 1 RT 1: 24-2096 bp Neighborhood of RT #1 [24, 2096] RVT-GII Intron_maturas2 Feature: gene Location: 24-1946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 291-1128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 91-112 8 bp Feature: domain Description: Intron_maturas2 Location: 1260-1500 bp Feature: domain Description: Intron_maturas2 Location: 12 60-1500 bp Feature: gene Location: 1965-2096 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)