myRT

myRT report for GCA_001557405.1_ASM155740v1

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Seq: LSKI01000156.1 Sphingomonas sp. CCH18-H6 CCH18-H6_contig158, whole genome shotgun sequence (2561 bp)
Overview 1 RT 1: 466-2092 bp Neighborhood of RT #1 [466, 2538] RVT-GII Intron_maturas2 Feature: gene Location: 466-597 bp Feature: gene Location: 616-2538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 883-1720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 883-1 720 bp Feature: domain Description: Intron_maturas2 Location: 1852-2092 bp Feature: domain Description: Intron_maturas2 Location: 1 852-2092 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: LSKI01000077.1 Sphingomonas sp. CCH18-H6 CCH18-H6_contig79, whole genome shotgun sequence (30779 bp)
Overview 1 RT 1: 24783-29012 bp Neighborhood of RT #1 [24783, 30715] COG5489 Hypoth_Ymh RVT-Retrons ParB_N_like Feature: gene Location: 24783-25259 bp Feature: domain Description: COG5489 Location: 24963-25257 bp Feature: domain Description: COG5489 Location: 2 4963-2 52 57 bp Feature: gene Location: 25403-26272 bp Feature: domain Description: Hypoth_Ymh Location: 25883-26243 bp Feature: domain Description: Hypoth_Ymh Location: 2 5883-2 62 43 bp Feature: gene Location: 26278-28020 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 26413-27043 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 6413-2 7043 bp Feature: gene Location: 28328-28552 bp Feature: gene Location: 28646-30715 bp Feature: domain Description: ParB_N_like Location: 28763-29012 bp Feature: domain Description: ParB_N_like Location: 2 8763-2 9012 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5489 (Uncharacterized conserved protein, DUF736 family ), Hypoth_Ymh (pfam09509), RVT-Retrons, ParB_N_like (cd16411)