myRT

myRT report for GCA_001557575.1_ASM155757v1

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Seq: KQ961019.1 Klebsiella pneumoniae strain CQMUS2 genomic scaffold Scaffold1, whole genome shotgun sequence (5290667 bp)
Overview 1 RT 1: 1384653-1389712 bp 2 RT 2: 1455540-1459648 bp 3 RT 3: 1587172-1593318 bp 4 RT 4: 1621111-1630599 bp Neighborhood of RT #1 [1384653, 1389712] Phage_lambda_P HTH_ICLR PerC RVT-GII PRK10597 Neighborhood of RT #2 [1455540, 1459650] DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [1587172, 1593326] Dcm Dcm Acetyltransf_1 RVT-GII PRK10597 DUF1367 Neighborhood of RT #4 [1621111, 1630610] SR_ResInv RVT-GII PRK10276 umuC PRK09951 RVT_N RVT-GII GIIM PRK09951 Feature: gene Location: 1384653-1385324 bp Feature: domain Description: Phage_lambda_P Location: 1384920-1385220 bp Feature: domain Description: Phage_lambda_P Location: 1 384920-1 385220 bp Feature: gene Location: 1385338-1385778 bp Feature: domain Description: HTH_ICLR Location: 1385362-1385518 bp Feature: domain Description: HTH_ICLR Location: 1 385362-1 38551 8 bp Feature: domain Description: PerC Location: 1385635-1385773 bp Feature: domain Description: PerC Location: 1 385635-1 385773 bp Feature: gene Location: 1387611-1389098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1388016-1388706 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 38801 6-1 388706 bp Feature: gene Location: 1389177-1389410 bp Feature: domain Description: PRK10597 Location: 1389180-1389405 bp Feature: domain Description: PRK1 0597 Location: 1 3891 80-1 389405 bp Feature: gene Location: 1389422-1389712 bp Feature: gene Location: 1455540-1455782 bp Feature: domain Description: DinI Location: 1455591-1455771 bp Feature: domain Description: DinI Location: 1 455591 -1 455771 bp Feature: gene Location: 1455797-1455943 bp Feature: gene Location: 1456397-1457884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1456802-1457492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 456802-1 457492 bp Feature: gene Location: 1457963-1458382 bp Feature: domain Description: PRK10276 Location: 1457966-1458377 bp Feature: domain Description: PRK1 0276 Location: 1 457966-1 458377 bp Feature: gene Location: 1458385-1459650 bp Feature: domain Description: umuC Location: 1458388-1459648 bp Feature: domain Description: umuC Location: 1 458388-1 459648 bp Feature: gene Location: 1587172-1589262 bp Feature: domain Description: Dcm Location: 1587193-1588060 bp Feature: domain Description: Dcm Location: 1 5871 93-1 588060 bp Feature: domain Description: Dcm Location: 1589065-1589221 bp Feature: domain Description: Dcm Location: 1 589065-1 589221 bp Feature: gene Location: 1589417-1589860 bp Feature: domain Description: Acetyltransf_1 Location: 1589492-1589816 bp Feature: domain Description: Acetyltransf_1 Location: 1 589492-1 58981 6 bp Feature: gene Location: 1590540-1592027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1590945-1591635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 590945-1 591 635 bp Feature: gene Location: 1592106-1592339 bp Feature: domain Description: PRK10597 Location: 1592109-1592334 bp Feature: domain Description: PRK1 0597 Location: 1 5921 09-1 592334 bp Feature: gene Location: 1592730-1593326 bp Feature: domain Description: DUF1367 Location: 1592733-1593318 bp Feature: domain Description: DUF1 367 Location: 1 592733-1 59331 8 bp Feature: gene Location: 1621111-1621980 bp Feature: gene Location: 1622084-1622389 bp Feature: domain Description: SR_ResInv Location: 1622159-1622345 bp Feature: domain Description: SR_ResInv Location: 1 6221 59-1 622345 bp Feature: gene Location: 1623838-1625325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1624243-1624933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 624243-1 624933 bp Feature: gene Location: 1625405-1625824 bp Feature: domain Description: PRK10276 Location: 1625408-1625819 bp Feature: domain Description: PRK1 0276 Location: 1 625408-1 62581 9 bp Feature: gene Location: 1625826-1627091 bp Feature: domain Description: umuC Location: 1625829-1627089 bp Feature: domain Description: umuC Location: 1 625829-1 627089 bp Feature: gene Location: 1627767-1628192 bp Feature: domain Description: PRK09951 Location: 1627839-1628181 bp Feature: domain Description: PRK09951 Location: 1 627839-1 6281 81 bp Feature: gene Location: 1628208-1629701 bp Feature: RT Description: RVT_N Location: 1628253-1628496 bp Feature: RT Description: RVT_N Location: 1 628253-1 628496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1628541-1629189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 628541 -1 6291 89 bp Feature: domain Description: GIIM Note: maturase Location: 1629249-1629477 bp Feature: domain Description: GIIM Note: maturase Location: 1 629249-1 629477 bp Feature: gene Location: 1629984-1630217 bp Feature: gene Location: 1630272-1630610 bp Feature: domain Description: PRK09951 Location: 1630275-1630599 bp Feature: domain Description: PRK09951 Location: 1 630275-1 630599 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_lambda_P (pfam06992), HTH_ICLR (smart00346), PerC (pfam06069), RVT-GII, PRK10597 (DNA damage-inducible protein I; Provisional), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), Dcm (COG0270), Acetyltransf_1 (pfam00583)
DUF1367 (pfam07105), SR_ResInv (cd03768), PRK09951 (hypothetical protein; Provisional), RVT_N (pfam13655), GIIM (pfam08388)

Seq: KQ961020.1 Klebsiella pneumoniae strain CQMUS2 genomic scaffold Scaffold2, whole genome shotgun sequence (241738 bp)
Overview 1 RT 1: 90524-93708 bp Neighborhood of RT #1 [90524, 93708] PRK10276 RVT-GII Feature: gene Location: 90524-90949 bp Feature: domain Description: PRK10276 Location: 90527-90935 bp Feature: domain Description: PRK102 76 Location: 9052 7-90935 bp Feature: gene Location: 91067-91300 bp Feature: gene Location: 91351-92862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91756-92470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91756-92 470 bp Feature: gene Location: 93096-93326 bp Feature: gene Location: 93385-93708 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII