myRT

myRT report for GCA_001557945.1_ASM155794v1

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Seq: LNRB01000033.1 Vibrio harveyi strain CUB2 NODE_33, whole genome shotgun sequence (16561 bp)
Overview 1 RT 1: 10709-14843 bp Neighborhood of RT #1 [10709, 14884] HTH_XRE RVT-Retrons HTH_36 PRK09692 Feature: gene Location: 10709-10960 bp Feature: gene Location: 10984-11274 bp Feature: domain Description: HTH_XRE Location: 11002-11164 bp Feature: domain Description: HTH_XRE Location: 1 1 002-1 1 1 64 bp Feature: gene Location: 11312-12223 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11393-11960 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 393-1 1 960 bp Feature: gene Location: 12518-13039 bp Feature: domain Description: HTH_36 Location: 12587-12749 bp Feature: domain Description: HTH_36 Location: 1 2587-1 2749 bp Feature: gene Location: 13661-14884 bp Feature: domain Description: PRK09692 Location: 13676-14843 bp Feature: domain Description: PRK09692 Location: 1 3676-1 4843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, HTH_36 (pfam13730), PRK09692 (Integrase; provisional)

Seq: LNRB01000009.1 Vibrio harveyi strain CUB2 NODE_9, whole genome shotgun sequence (280879 bp)
Overview 1 RT 1: 108904-118112 bp 2 RT 2: 128747-134842 bp Neighborhood of RT #1 [108904, 118112] Smc Smc Smc RVT-UG1 Neighborhood of RT #2 [128747, 134850] RVT-Retrons PRK05367 PRK01202 Feature: gene Location: 108904-110784 bp Feature: domain Description: Smc Location: 108982-109081 bp Feature: domain Description: Smc Location: 108982 -109081 bp Feature: domain Description: Smc Location: 109486-109861 bp Feature: domain Description: Smc Location: 109486-109861 bp Feature: domain Description: Smc Location: 110041-110374 bp Feature: domain Description: Smc Location: 110041-110374 bp Feature: gene Location: 111421-111798 bp Feature: gene Location: 111867-115712 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 112509-113028 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 112 509-11302 8 bp Feature: gene Location: 115928-117547 bp Feature: gene Location: 117633-118112 bp Feature: gene Location: 128747-129622 bp Feature: gene Location: 129626-129973 bp Feature: gene Location: 130130-131176 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 130361-130910 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 130361-130910 bp Feature: gene Location: 131476-134340 bp Feature: domain Description: PRK05367 Location: 131497-134335 bp Feature: domain Description: PRK05367 Location: 131497-134335 bp Feature: gene Location: 134470-134850 bp Feature: domain Description: PRK01202 Location: 134476-134842 bp Feature: domain Description: PRK012 02 Location: 134476-134842 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Smc (COG1196), RVT-UG1, RVT-Retrons, PRK05367 (aminomethyl-transferring glycine dehydrogenase), PRK01202 (glycine cleavage system protein GcvH)