myRT

myRT report for GCA_001558055.1_ASM155805v1

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Seq: LNRO01000003.1 Vibrio splendidus strain MARa NODE_3, whole genome shotgun sequence (682775 bp)
Overview 1 RT 1: 659624-664561 bp Neighborhood of RT #1 [659624, 664965] HTH_Tnp_1 Big_1 Big_1 RVT-GII HipB Feature: gene Location: 659624-659914 bp Feature: domain Description: HTH_Tnp_1 Location: 659639-659843 bp Feature: domain Description: HTH_Tnp_1 Location: 659639-659843 bp Feature: gene Location: 660093-662672 bp Feature: domain Description: Big_1 Location: 661608-661797 bp Feature: domain Description: Big_1 Location: 661 608-661 797 bp Feature: domain Description: Big_1 Location: 661923-661998 bp Feature: domain Description: Big_1 Location: 661 923-661 998 bp Feature: gene Location: 663111-663371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 663117-663255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6631 1 7-663255 bp Feature: gene Location: 663749-663898 bp Feature: gene Location: 664105-664965 bp Feature: domain Description: HipB Location: 664108-664561 bp Feature: domain Description: HipB Location: 6641 08-664561 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), Big_1 (pfam02369), RVT-GII, HipB (COG1396)

Seq: LNRO01000005.1 Vibrio splendidus strain MARa NODE_5, whole genome shotgun sequence (392356 bp)
Overview 1 RT 1: 181706-187114 bp Neighborhood of RT #1 [181706, 187119] RVT-UG3 RVT-UG8 PRK10262 Feature: gene Location: 181706-181894 bp Feature: gene Location: 182003-182137 bp Feature: gene Location: 182260-183519 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 182542-183073 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 182 542 -183073 bp Feature: gene Location: 183512-185509 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 184043-184481 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 184043-184481 bp Feature: gene Location: 185667-185819 bp Feature: gene Location: 186160-187119 bp Feature: domain Description: PRK10262 Location: 186163-187114 bp Feature: domain Description: PRK102 62 Location: 186163-187114 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG3, RVT-UG8, PRK10262 (thioredoxin reductase; Provisional)