myRT

myRT report for GCA_001561575.1_ASM156157v1

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Seq: LRWQ01000057.1 Escherichia coli strain B87 Contig_57, whole genome shotgun sequence (55506 bp)
Overview 1 RT 1: 39350-43102 bp Neighborhood of RT #1 [39350, 43311] DinI RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 39350-39583 bp Feature: domain Description: DinI Location: 39392-39578 bp Feature: domain Description: DinI Location: 39392-39578 bp Feature: gene Location: 39752-39886 bp Feature: gene Location: 40062-40997 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40164-40758 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 401 64-40758 bp Feature: gene Location: 40997-42631 bp Feature: domain Description: COG3950 Location: 41135-42593 bp Feature: domain Description: COG3950 Location: 41 1 35-42593 bp Feature: gene Location: 42751-43311 bp Feature: domain Description: TIGR02646 Location: 42754-43102 bp Feature: domain Description: TIGR02646 Location: 42754-431 02 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: LRWQ01000093.1 Escherichia coli strain B87 Contig_93, whole genome shotgun sequence (83172 bp)
Overview 1 RT 1: 63041-69573 bp Neighborhood of RT #1 [63041, 69573] Phage_GPA RVT-AbiP2 Feature: gene Location: 63041-65317 bp Feature: domain Description: Phage_GPA Location: 63440-64427 bp Feature: domain Description: Phage_GPA Location: 63440-6442 7 bp Feature: gene Location: 65379-65639 bp Feature: gene Location: 65805-67349 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 66222-66675 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 662 2 2 -66675 bp Feature: gene Location: 67799-68881 bp Feature: gene Location: 68884-69573 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_GPA (pfam05840), RVT-AbiP2