myRT

myRT report for GCA_001561835.1_ASM156183v1

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Seq: LRXC01000108.1 Escherichia coli strain F11 Contig_109, whole genome shotgun sequence (53277 bp)
Overview 1 RT 1: 15259-19550 bp Neighborhood of RT #1 [15259, 19550] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 15259-16521 bp Feature: domain Description: YesM Location: 15772-16513 bp Feature: domain Description: YesM Location: 1 5772-1 651 3 bp Feature: gene Location: 16551-16721 bp Feature: gene Location: 17071-17592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17077-17359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7077-1 7359 bp Feature: domain Description: GIIM Note: maturase Location: 17407-17587 bp Feature: domain Description: GIIM Note: maturase Location: 1 7407-1 7587 bp Feature: gene Location: 17620-18159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17950-18028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7950-1 8028 bp Feature: gene Location: 18190-18387 bp Feature: gene Location: 18645-19550 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)

Seq: LRXC01000139.1 Escherichia coli strain F11 Contig_140, whole genome shotgun sequence (432967 bp)
Overview 1 RT 1: 261198-264142 bp Neighborhood of RT #1 [261198, 264339] SLATT_5 RVT-UG17 Peptidase_S74 Feature: gene Location: 261198-261338 bp Feature: gene Location: 261351-261902 bp Feature: domain Description: SLATT_5 Location: 261357-261873 bp Feature: domain Description: SLATT_5 Location: 2 61357-2 61873 bp Feature: gene Location: 261880-263250 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 262108-262714 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2 62 108-2 62 714 bp Feature: gene Location: 263358-263645 bp Feature: gene Location: 263656-264339 bp Feature: domain Description: Peptidase_S74 Location: 263983-264142 bp Feature: domain Description: Peptidase_S74 Location: 2 63983-2 64142 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, Peptidase_S74 (pfam13884)