myRT

myRT report for GCA_001562005.1_ASM156200v1

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Seq: LASB01000484.1 Endozoicomonas arenosclerae strain E-MC227 Contig484, whole genome shotgun sequence (13165 bp)
Overview 1 RT 1: 10877-13164 bp Neighborhood of RT #1 [10877, 13164] HTH_Tnp_1 InsA RVT-Retrons Feature: gene Location: 10877-11143 bp Feature: domain Description: HTH_Tnp_1 Location: 10883-11090 bp Feature: domain Description: HTH_Tnp_1 Location: 1 0883-1 1 090 bp Feature: gene Location: 11292-11552 bp Feature: domain Description: InsA Location: 11295-11550 bp Feature: domain Description: InsA Location: 1 1 295-1 1 550 bp Feature: gene Location: 11731-12684 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11914-12451 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 91 4-1 2451 bp Feature: gene Location: 12697-12930 bp Feature: gene Location: 12943-13164 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), InsA (COG3677), RVT-Retrons

Seq: LASB01000486.1 Endozoicomonas arenosclerae strain E-MC227 Contig486, whole genome shotgun sequence (7308 bp)
Overview 1 RT 1: 2-4921 bp Neighborhood of RT #1 [2, 4935] RVT-GII PRK09275 Feature: gene Location: 2-499 bp Feature: gene Location: 622-1647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 667-1279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 667-12 79 bp Feature: gene Location: 2119-3165 bp Feature: gene Location: 3337-4935 bp Feature: domain Description: PRK09275 Location: 3361-4921 bp Feature: domain Description: PRK092 75 Location: 3361-492 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09275 (bifunctional aspartate transaminase/aspartate 4-decarboxylase), RVT-GII

Seq: LASB01000082.1 Endozoicomonas arenosclerae strain E-MC227 Contig82, whole genome shotgun sequence (4554 bp)
Overview 1 RT 1: 3-3105 bp Neighborhood of RT #1 [3, 3105] HTH_Tnp_1 RVT-Retrons abortive_AbiA Feature: gene Location: 3-146 bp Feature: gene Location: 285-548 bp Feature: domain Description: HTH_Tnp_1 Location: 330-540 bp Feature: domain Description: HTH_Tnp_1 Location: 3 3 0-540 bp Feature: gene Location: 617-1558 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 719-1307 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 719-13 07 bp Feature: domain Description: abortive_AbiA Location: 1349-1475 bp Feature: domain Description: abortive_AbiA Location: 13 49-1475 bp Feature: gene Location: 1548-2462 bp Feature: gene Location: 2719-3105 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), RVT-Retrons, abortive_AbiA (TIGR04499)

Seq: LASB01001216.1 Endozoicomonas arenosclerae strain E-MC227 endozoycomonas_090215_2_c1144, whole genome shotgun sequence (1713 bp)
Overview 1 RT 1: 3-1514 bp Neighborhood of RT #1 [3, 1711] DUF772 RVT-GII GIIM Feature: gene Location: 3-299 bp Feature: domain Description: DUF772 Location: 156-294 bp Feature: domain Description: DUF772 Location: 156-294 bp Feature: gene Location: 336-1076 bp Feature: gene Location: 1154-1711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1160-1274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1160-1274 bp Feature: domain Description: GIIM Note: maturase Location: 1316-1514 bp Feature: domain Description: GIIM Note: maturase Location: 1316-1514 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF772 (pfam05598)

Seq: LASB01000537.1 Endozoicomonas arenosclerae strain E-MC227 endozoycomonas_090215_2_c18, whole genome shotgun sequence (9512 bp)
Overview 1 RT 1: 8523-9416 bp Neighborhood of RT #1 [8523, 9511] T6SS_HCP RVT-GII Feature: gene Location: 8523-8663 bp Feature: gene Location: 8695-9183 bp Feature: domain Description: T6SS_HCP Location: 8707-9094 bp Feature: domain Description: T6SS_HCP Location: 8707-9094 bp Feature: gene Location: 9359-9511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9362-9416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9362-9416 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T6SS_HCP (pfam05638), RVT-GII