myRT

myRT report for GCA_001562015.1_ASM156201v1

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Seq: LASA01000155.1 Endozoicomonas arenosclerae strain ab112 bacteriosponge_c131, whole genome shotgun sequence (55473 bp)
Overview 1 RT 1: 50749-53627 bp Neighborhood of RT #1 [50749, 53627] T6SS_HCP RVT-GII Feature: gene Location: 50749-51126 bp Feature: gene Location: 51422-51910 bp Feature: domain Description: T6SS_HCP Location: 51434-51821 bp Feature: domain Description: T6SS_HCP Location: 51 434-51 821 bp Feature: gene Location: 52086-52574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52422-52497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52422-52497 bp Feature: gene Location: 52603-53067 bp Feature: gene Location: 53223-53627 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T6SS_HCP (pfam05638), RVT-GII

Seq: LASA01000253.1 Endozoicomonas arenosclerae strain ab112 bacteriosponge_c263, whole genome shotgun sequence (4441 bp)
Overview 1 RT 1: 1-3118 bp Neighborhood of RT #1 [1, 3118] HTH_Tnp_1 RVT-Retrons abortive_AbiA Feature: gene Location: 1-159 bp Feature: gene Location: 298-561 bp Feature: domain Description: HTH_Tnp_1 Location: 343-553 bp Feature: domain Description: HTH_Tnp_1 Location: 343-553 bp Feature: gene Location: 630-1571 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 732-1320 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 732 -132 0 bp Feature: domain Description: abortive_AbiA Location: 1362-1488 bp Feature: domain Description: abortive_AbiA Location: 1362 -1488 bp Feature: gene Location: 1561-2475 bp Feature: gene Location: 2732-3118 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), RVT-Retrons, abortive_AbiA (TIGR04499)

Seq: LASA01000291.1 Endozoicomonas arenosclerae strain ab112 bacteriosponge_c309, whole genome shotgun sequence (538 bp)
Overview 1 RT 1: 3-291 bp Neighborhood of RT #1 [3, 290] RVT-GII Feature: gene Location: 3-290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45-291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45-291 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: LASA01000054.1 Endozoicomonas arenosclerae strain ab112 bacteriosponge_c5, whole genome shotgun sequence (95132 bp)
Overview 1 RT 1: 77351-81205 bp Neighborhood of RT #1 [77351, 81258] RVT-Retrons InsA HTH_Tnp_1 Feature: gene Location: 77351-79192 bp Feature: gene Location: 79205-79438 bp Feature: gene Location: 79451-80404 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 79634-80171 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 79634 -80171 bp Feature: gene Location: 80583-80843 bp Feature: domain Description: InsA Location: 80586-80841 bp Feature: domain Description: InsA Location: 80586-8084 1 bp Feature: gene Location: 80992-81258 bp Feature: domain Description: HTH_Tnp_1 Location: 80998-81205 bp Feature: domain Description: HTH_Tnp_1 Location: 80998-81205 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, InsA (COG3677), HTH_Tnp_1 (pfam01527)

Seq: LASA01000114.1 Endozoicomonas arenosclerae strain ab112 bacteriosponge_c79, whole genome shotgun sequence (56917 bp)
Overview 1 RT 1: 35479-39474 bp 2 RT 2: 43083-48146 bp Neighborhood of RT #1 [35479, 39488] RVT-GII PhdYeFM_antitox COG5611 Neighborhood of RT #2 [43083, 48388] RVT-GII GIIM PRK02224 Zn_Tnp_IS91 Y2_Tnp Feature: gene Location: 35479-36237 bp Feature: gene Location: 36649-36936 bp Feature: gene Location: 36941-38383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37328-38015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37328-38015 bp Feature: gene Location: 38661-38915 bp Feature: domain Description: PhdYeFM_antitox Location: 38673-38847 bp Feature: domain Description: PhdYeFM_antitox Location: 38673-38847 bp Feature: gene Location: 39093-39488 bp Feature: domain Description: COG5611 Location: 39096-39474 bp Feature: domain Description: COG5 611 Location: 39096-39474 bp Feature: gene Location: 43083-43445 bp Feature: gene Location: 44002-44172 bp Feature: gene Location: 44195-45430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44375-44993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44375 -44993 bp Feature: domain Description: GIIM Note: maturase Location: 45035-45233 bp Feature: domain Description: GIIM Note: maturase Location: 45 035 -45 233 bp Feature: gene Location: 45507-46871 bp Feature: domain Description: PRK02224 Location: 45876-46431 bp Feature: domain Description: PRK02224 Location: 45 876-46431 bp Feature: gene Location: 47180-48388 bp Feature: domain Description: Zn_Tnp_IS91 Location: 47234-47501 bp Feature: domain Description: Zn_Tnp_IS91 Location: 47234-475 01 bp Feature: domain Description: Y2_Tnp Location: 47627-48146 bp Feature: domain Description: Y2_Tnp Location: 47627-48146 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PhdYeFM_antitox (pfam02604), COG5611 (Predicted nucleic-acid-binding protein, contains PIN domain ), GIIM (pfam08388), PRK02224 (DNA double-strand break repair Rad50 ATPase), Zn_Tnp_IS91 (pfam14319), Y2_Tnp (pfam04986)