myRT

myRT report for GCA_001562715.1_ASM156271v1

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Seq: LNUG01000052.1 Escherichia coli strain SYAU1 Scaffold43_1, whole genome shotgun sequence (6133 bp)
Overview 1 RT 1: 2542-5954 bp Neighborhood of RT #1 [2542, 5962] InsE PHA02517 RVT-GII GIIM Tra5 Feature: gene Location: 2542-2841 bp Feature: domain Description: InsE Location: 2572-2836 bp Feature: domain Description: InsE Location: 2572-2836 bp Feature: gene Location: 2838-3305 bp Feature: domain Description: PHA02517 Location: 2904-3243 bp Feature: domain Description: PHA0251 7 Location: 2904-3243 bp Feature: gene Location: 3897-5138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4170-4902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 70-4902 bp Feature: domain Description: GIIM Note: maturase Location: 4977-5133 bp Feature: domain Description: GIIM Note: maturase Location: 4977-51 33 bp Feature: gene Location: 5190-5420 bp Feature: gene Location: 5531-5962 bp Feature: domain Description: Tra5 Location: 5537-5954 bp Feature: domain Description: Tra5 Location: 5537-5954 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Tra5 (COG2801)