myRT

myRT report for GCA_001562815.1_ASM156281v1

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Seq: LNUF01000058.1 Escherichia coli strain SYAB4 Scaffold51_1, whole genome shotgun sequence (6129 bp)
Overview 1 RT 1: 2540-5952 bp Neighborhood of RT #1 [2540, 5960] InsE PHA02517 RVT-GII GIIM Tra5 Feature: gene Location: 2540-2839 bp Feature: domain Description: InsE Location: 2570-2834 bp Feature: domain Description: InsE Location: 2570-2834 bp Feature: gene Location: 2836-3303 bp Feature: domain Description: PHA02517 Location: 2902-3241 bp Feature: domain Description: PHA0251 7 Location: 2902-3241 bp Feature: gene Location: 3895-5136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4168-4900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 68-4900 bp Feature: domain Description: GIIM Note: maturase Location: 4975-5131 bp Feature: domain Description: GIIM Note: maturase Location: 4975-51 31 bp Feature: gene Location: 5188-5418 bp Feature: gene Location: 5529-5960 bp Feature: domain Description: Tra5 Location: 5535-5952 bp Feature: domain Description: Tra5 Location: 5535-5952 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Tra5 (COG2801)