myRT

myRT report for GCA_001564615.1_LM06-00444_assembly

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Seq: CYUX01000005.1 Listeria monocytogenes strain LM06-00444 genome assembly, contig: LM600444_Contig_13, whole genome shotgun sequence (195565 bp)
Overview 1 RT 1: 89031-94559 bp Neighborhood of RT #1 [89031, 94570] ALDH_F6_MMSDH GlpR RVT-UG17 SLATT_5 Cass2 Feature: gene Location: 89031-90497 bp Ori: CUK54444.1 Gene: mmsA Feature: domain Description: ALDH_F6_MMSDH Location: 89055-90474 bp Feature: domain Description: ALDH_F6_MMSDH Location: 89055-90474 bp Feature: gene Location: 90692-91453 bp Ori: CUK54447.1 Gene: iolR Feature: domain Description: GlpR Location: 90698-91442 bp Feature: domain Description: GlpR Location: 90698-91 442 bp Feature: gene Location: 91881-93239 bp Ori: CUK54452.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 92106-92679 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 921 06-92679 bp Feature: gene Location: 93236-93835 bp Ori: CUK54457.1 Feature: domain Description: SLATT_5 Location: 93269-93815 bp Feature: domain Description: SLATT_5 Location: 93269-9381 5 bp Feature: gene Location: 94151-94570 bp Ori: CUK54461.1 Feature: domain Description: Cass2 Location: 94163-94559 bp Feature: domain Description: Cass2 Location: 941 63-94559 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ALDH_F6_MMSDH (cd07085), GlpR (COG1349), RVT-UG17, SLATT_5 (pfam18160), Cass2 (pfam14526)