myRT

myRT report for GCA_001565915.1_5103_7_1

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Seq: CTIY01000022.1 Yersinia enterocolitica genome assembly 5103_7#1, scaffold ERS008580SCcontig000022, whole genome shotgun sequence (60973 bp)
Overview 1 RT 1: 53728-57576 bp Neighborhood of RT #1 [53728, 57576] Phage_Nu1 RVT-UG2 Feature: gene Location: 53728-54258 bp Ori: CQH62337.1 Feature: domain Description: Phage_Nu1 Location: 53731-53845 bp Feature: domain Description: Phage_Nu1 Location: 53731 -53845 bp Feature: gene Location: 54821-54997 bp Feature: gene Location: 55428-56705 bp Ori: CQH62343.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 55626-56412 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 55626-5641 2 bp Feature: gene Location: 56796-56921 bp Feature: gene Location: 56926-57576 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_Nu1 (pfam07471), RVT-UG2

Seq: CTIY01000004.1 Yersinia enterocolitica genome assembly 5103_7#1, scaffold ERS008580SCcontig000004, whole genome shotgun sequence (344847 bp)
Overview 1 RT 1: 246274-251046 bp Neighborhood of RT #1 [246274, 251069] PRK09692 RVT-Retrons InsE Feature: gene Location: 246274-247503 bp Ori: CQH35147.1 Gene: intA_1 Feature: domain Description: PRK09692 Location: 246277-247483 bp Feature: domain Description: PRK09692 Location: 2 462 77-2 47483 bp Feature: gene Location: 247891-248847 bp Feature: gene Location: 248837-249775 bp Ori: CQH35176.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 248960-249548 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 48960-2 49548 bp Feature: gene Location: 249829-250635 bp Feature: gene Location: 250761-251069 bp Ori: CQH35199.1 Gene: tnpA Feature: domain Description: InsE Location: 250767-251046 bp Feature: domain Description: InsE Location: 2 50767-2 51046 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, InsE (COG2963)