myRT

myRT report for GCA_001566435.1_ASM156643v1

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Seq: LQZZ01000252.1 Bacillus cereus strain MB.16, whole genome shotgun sequence (8435 bp)
Overview 1 RT 1: 226-6229 bp Neighborhood of RT #1 [226, 6288] SalY RVT-GII LolE LolD Feature: gene Location: 226-1356 bp Feature: domain Description: SalY Location: 268-1345 bp Feature: domain Description: SalY Location: 268-1 345 bp Feature: gene Location: 1417-3315 bp Ori: KXJ00031.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1732-2434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 732-2434 bp Feature: gene Location: 4082-5551 bp Feature: domain Description: LolE Location: 4103-5219 bp Feature: domain Description: LolE Location: 41 03-521 9 bp Feature: gene Location: 5542-6288 bp Ori: KXJ00027.1 Feature: domain Description: LolD Location: 5566-6229 bp Feature: domain Description: LolD Location: 5566-6229 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SalY (COG0577), RVT-GII, LolE (COG4591), LolD (COG1136)

Seq: LQZZ01000330.1 Bacillus cereus strain MB.16, whole genome shotgun sequence (33972 bp)
Overview 1 RT 1: 25793-32744 bp Neighborhood of RT #1 [25793, 32744] HepA RVT-GII HNHc DEXDc Feature: gene Location: 25793-26506 bp Feature: gene Location: 26523-28172 bp Feature: domain Description: HepA Location: 27384-27618 bp Feature: domain Description: HepA Location: 2 7384-2 7618 bp Feature: gene Location: 28266-30065 bp Ori: KXI98760.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28569-29271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 8569-2 92 71 bp Feature: domain Description: HNHc Note: nucleases Location: 29796-29946 bp Feature: domain Description: HNHc Note: nucleases Location: 2 9796-2 9946 bp Feature: gene Location: 30766-32445 bp Ori: KXI98761.1 Feature: domain Description: DEXDc Location: 31546-32419 bp Feature: domain Description: DEXDc Location: 31546-32 419 bp Feature: gene Location: 32517-32744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HepA (COG0553), RVT-GII, HNHc (smart00507), DEXDc (smart00487)

Seq: LQZZ01000327.1 Bacillus cereus strain MB.16, whole genome shotgun sequence (30970 bp)
Overview 1 RT 1: 7511-17217 bp Neighborhood of RT #1 [7511, 17217] TraC-F-type RVT-GII HNHc TraC-F-type Feature: gene Location: 7511-8425 bp Feature: gene Location: 8428-9396 bp Feature: domain Description: TraC-F-type Location: 8848-9322 bp Feature: domain Description: TraC-F-type Location: 8848-93 22 bp Feature: gene Location: 10115-11947 bp Ori: KXI98832.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10415-11120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10415-11120 bp Feature: domain Description: HNHc Note: nucleases Location: 11699-11831 bp Feature: domain Description: HNHc Note: nucleases Location: 11699-1183 1 bp Feature: gene Location: 12064-13206 bp Feature: domain Description: TraC-F-type Location: 12067-13045 bp Feature: domain Description: TraC-F-type Location: 12067-13 045 bp Feature: gene Location: 13237-17217 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraC-F-type (TIGR02746), RVT-GII, HNHc (smart00507)

Seq: LQZZ01000349.1 Bacillus cereus strain MB.16, whole genome shotgun sequence (70265 bp)
Overview 1 RT 1: 18775-24973 bp Neighborhood of RT #1 [18775, 24978] PP2C_2 asn_synth_AEB RVT-GII HNHc AsnB PRK06811 Feature: gene Location: 18775-19602 bp Ori: KXI97910.1 Feature: domain Description: PP2C_2 Location: 19147-19486 bp Feature: domain Description: PP2C_2 Location: 1914 7-194 86 bp Feature: gene Location: 19645-21327 bp Ori: KXI97911.1 Feature: domain Description: asn_synth_AEB Location: 19675-21103 bp Feature: domain Description: asn_synth_AEB Location: 19675-21103 bp Feature: gene Location: 21408-23240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21708-22413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21708-224 13 bp Feature: domain Description: HNHc Note: nucleases Location: 22992-23124 bp Feature: domain Description: HNHc Note: nucleases Location: 22992-23124 bp Feature: gene Location: 23956-24153 bp Ori: KXI97912.1 Feature: domain Description: AsnB Location: 23965-24142 bp Feature: domain Description: AsnB Location: 23965-24 14 2 bp Feature: gene Location: 24412-24978 bp Ori: KXI97913.1 Feature: domain Description: PRK06811 Location: 24415-24973 bp Feature: domain Description: PRK06811 Location: 24 4 15-24 973 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PP2C_2 (pfam13672), asn_synth_AEB (TIGR01536), RVT-GII, HNHc (smart00507), AsnB (COG0367), PRK06811 (RNA polymerase factor sigma-70; Validated)

Seq: LQZZ01000171.1 Bacillus cereus strain MB.16, whole genome shotgun sequence (2885 bp)
Overview 1 RT 1: 181-1993 bp Neighborhood of RT #1 [181, 2109] RVT-GII HNHc Feature: gene Location: 181-2109 bp Ori: KXJ00399.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 502-1237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 02-1237 bp Feature: domain Description: HNHc Note: nucleases Location: 1828-1993 bp Feature: domain Description: HNHc Note: nucleases Location: 1828-1993 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: LQZZ01001139.1 Bacillus cereus strain MB.16, whole genome shotgun sequence (517 bp)
Overview 1 RT 1: 180-330 bp Neighborhood of RT #1 [180, 491] RVT-GII Feature: gene Location: 180-491 bp Ori: KXI94935.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 198-330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 198-330 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: LQZZ01000363.1 Bacillus cereus strain MB.16, whole genome shotgun sequence (246174 bp)
Overview 1 RT 1: 151000-158266 bp Neighborhood of RT #1 [151000, 158274] PRK08068 nitrilase_5 RVT-GII HNHc mtnK mtnA Feature: gene Location: 151000-152178 bp Ori: KXI96325.1 Feature: domain Description: PRK08068 Location: 151009-152170 bp Feature: domain Description: PRK08068 Location: 151009-15217 0 bp Feature: gene Location: 152169-152948 bp Ori: KXI96326.1 Feature: domain Description: nitrilase_5 Location: 152283-152934 bp Feature: domain Description: nitrilase_5 Location: 152283-152934 bp Feature: gene Location: 153664-155496 bp Ori: KXI96327.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 153964-154669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 153964-154669 bp Feature: domain Description: HNHc Note: nucleases Location: 155248-155380 bp Feature: domain Description: HNHc Note: nucleases Location: 155248-155380 bp Feature: gene Location: 156041-157222 bp Ori: KXI96328.1 Gene: mtnK Feature: domain Description: mtnK Location: 156044-157202 bp Feature: domain Description: mtnK Location: 156044-157 202 bp Feature: gene Location: 157219-158274 bp Ori: KXI96329.1 Gene: mtnA Feature: domain Description: mtnA Location: 157243-158266 bp Feature: domain Description: mtnA Location: 157 243-158266 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08068 (transaminase; Reviewed), nitrilase_5 (cd07583), RVT-GII, HNHc (smart00507), mtnK (PRK09550), mtnA (PRK05720)

Seq: LQZZ01000108.1 Bacillus cereus strain MB.16, whole genome shotgun sequence (1347 bp)
Overview 1 RT 1: 535-1342 bp Neighborhood of RT #1 [535, 1347] RVT-GII Intron_maturas2 Feature: gene Location: 535-1347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 541-1045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 541-1045 bp Feature: domain Description: Intron_maturas2 Location: 1129-1342 bp Feature: domain Description: Intron_maturas2 Location: 1129-1342 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: LQZZ01000154.1 Bacillus cereus strain MB.16, whole genome shotgun sequence (2375 bp)
Overview 1 RT 1: 613-1906 bp Neighborhood of RT #1 [613, 2259] RVT_N RVT-GII GIIM Feature: gene Location: 613-2259 bp Ori: KXJ00430.1 Feature: domain Description: RVT_N Location: 655-892 bp Feature: domain Description: RVT_N Location: 655-89 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 946-1606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9 46-1606 bp Feature: domain Description: GIIM Note: maturase Location: 1675-1906 bp Feature: domain Description: GIIM Note: maturase Location: 1675-19 06 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: LQZZ01000021.1 Bacillus cereus strain MB.16, whole genome shotgun sequence (688 bp)
Overview 1 RT 1: 17-467 bp Neighborhood of RT #1 [17, 469] RVT_N RVT-GII Feature: gene Location: 17-469 bp Ori: KXJ00530.1 Feature: domain Description: RVT_N Location: 20-140 bp Feature: domain Description: RVT_N Location: 20-140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 197-467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 197-467 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: LQZZ01000340.1 Bacillus cereus strain MB.16, whole genome shotgun sequence (54492 bp)
Overview 1 RT 1: 19517-24749 bp 2 RT 2: 28345-37376 bp Neighborhood of RT #1 [19517, 24749] beta_clamp RVT-GII COG4712 Neighborhood of RT #2 [28345, 37376] rpsA nuc_hydro RVT_N RVT-GII GIIM TraG-D_C Ftsk_gamma Ftsk_gamma Feature: gene Location: 19517-20629 bp Ori: KXI98392.1 Feature: domain Description: beta_clamp Location: 19520-20624 bp Feature: domain Description: beta_clamp Location: 19520-20624 bp Feature: gene Location: 20710-21237 bp Feature: gene Location: 21315-23213 bp Ori: KXI98420.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21630-22332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21630-22332 bp Feature: gene Location: 23975-24331 bp Ori: KXI98394.1 Feature: domain Description: COG4712 Location: 23984-24326 bp Feature: domain Description: COG4712 Location: 23984-24326 bp Feature: gene Location: 24354-24749 bp Feature: gene Location: 28345-29328 bp Ori: KXI98401.1 Feature: domain Description: rpsA Location: 28612-29149 bp Feature: domain Description: rpsA Location: 28612-29149 bp Feature: gene Location: 29943-30893 bp Ori: KXI98402.1 Feature: domain Description: nuc_hydro Location: 29958-30864 bp Feature: domain Description: nuc_hydro Location: 29958-30864 bp Feature: gene Location: 31613-33259 bp Ori: KXI98403.1 Feature: domain Description: RVT_N Location: 31655-31892 bp Feature: domain Description: RVT_N Location: 31655-31892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31946-32606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31946-32606 bp Feature: domain Description: GIIM Note: maturase Location: 32675-32906 bp Feature: domain Description: GIIM Note: maturase Location: 32675-32906 bp Feature: gene Location: 33472-36972 bp Ori: KXI98404.1 Feature: domain Description: TraG-D_C Location: 35089-35449 bp Feature: domain Description: TraG-D_C Location: 35089-35449 bp Feature: domain Description: Ftsk_gamma Location: 35857-36034 bp Feature: domain Description: Ftsk_gamma Location: 35857-36034 bp Feature: domain Description: Ftsk_gamma Location: 36166-36301 bp Feature: domain Description: Ftsk_gamma Location: 36166-36301 bp Feature: gene Location: 36990-37376 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT beta_clamp (cl29549), RVT-GII, COG4712 (Uncharacterized protein ), rpsA (TIGR00717), nuc_hydro (cl00226), RVT_N (pfam13655), GIIM (pfam08388), TraG-D_C (pfam12696), Ftsk_gamma (smart00843)

Seq: LQZZ01000116.1 Bacillus cereus strain MB.16, whole genome shotgun sequence (1387 bp)
Overview 1 RT 1: 265-967 bp Neighborhood of RT #1 [265, 981] RVT-GII Feature: gene Location: 265-981 bp Ori: KXJ00488.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 781-967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 781-967 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII