myRT

myRT report for GCA_001566445.1_ASM156644v1

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Seq: LQZL01000061.1 Bacillus cereus strain MB.17 contig_153, whole genome shotgun sequence (28132 bp)
Overview 1 RT 1: 19953-26904 bp Neighborhood of RT #1 [19953, 26904] HepA RVT-GII HNHc DEXDc Feature: gene Location: 19953-20666 bp Feature: gene Location: 20683-22332 bp Feature: domain Description: HepA Location: 21544-21778 bp Feature: domain Description: HepA Location: 21 544-21 778 bp Feature: gene Location: 22426-24225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22729-23431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22729-23431 bp Feature: domain Description: HNHc Note: nucleases Location: 23956-24106 bp Feature: domain Description: HNHc Note: nucleases Location: 23956-241 06 bp Feature: gene Location: 24926-26605 bp Feature: domain Description: DEXDc Location: 25706-26579 bp Feature: domain Description: DEXDc Location: 25706-26579 bp Feature: gene Location: 26677-26904 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HepA (COG0553), RVT-GII, HNHc (smart00507), DEXDc (smart00487)

Seq: LQZL01000185.1 Bacillus cereus strain MB.17 contig_85, whole genome shotgun sequence (2885 bp)
Overview 1 RT 1: 181-1993 bp Neighborhood of RT #1 [181, 2109] RVT-GII HNHc Feature: gene Location: 181-2109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 502-1237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 502 -12 37 bp Feature: domain Description: HNHc Note: nucleases Location: 1828-1993 bp Feature: domain Description: HNHc Note: nucleases Location: 182 8-1993 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: LQZL01000183.1 Bacillus cereus strain MB.17 contig_83, whole genome shotgun sequence (2779 bp)
Overview 1 RT 1: 774-1791 bp Neighborhood of RT #1 [774, 2672] RVT-GII Feature: gene Location: 774-2672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1089-1791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1089-1791 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: LQZL01000182.1 Bacillus cereus strain MB.17 contig_82, whole genome shotgun sequence (2681 bp)
Overview 1 RT 1: 734-2450 bp Neighborhood of RT #1 [734, 2566] RVT-GII HNHc Feature: gene Location: 734-2566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1034-1739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1034 -1739 bp Feature: domain Description: HNHc Note: nucleases Location: 2318-2450 bp Feature: domain Description: HNHc Note: nucleases Location: 2318-24 50 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: LQZL01000064.1 Bacillus cereus strain MB.17 contig_156, whole genome shotgun sequence (31996 bp)
Overview 1 RT 1: 4486-13517 bp Neighborhood of RT #1 [4486, 13517] rpsA nuc_hydro RVT_N RVT-GII GIIM TraG-D_C Ftsk_gamma Ftsk_gamma Feature: gene Location: 4486-5469 bp Feature: domain Description: rpsA Location: 4753-5290 bp Feature: domain Description: rpsA Location: 475 3-5 290 bp Feature: gene Location: 6084-7034 bp Feature: domain Description: nuc_hydro Location: 6099-7005 bp Feature: domain Description: nuc_hydro Location: 6099-7005 bp Feature: gene Location: 7754-9400 bp Feature: RT Description: RVT_N Location: 7796-8033 bp Feature: RT Description: RVT_N Location: 7796-8033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8087-8747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8087-8747 bp Feature: domain Description: GIIM Note: maturase Location: 8816-9047 bp Feature: domain Description: GIIM Note: maturase Location: 8816-9047 bp Feature: gene Location: 9613-13113 bp Feature: domain Description: TraG-D_C Location: 11230-11590 bp Feature: domain Description: TraG-D_C Location: 11230-115 90 bp Feature: domain Description: Ftsk_gamma Location: 11998-12175 bp Feature: domain Description: Ftsk_gamma Location: 11998-12175 bp Feature: domain Description: Ftsk_gamma Location: 12307-12442 bp Feature: domain Description: Ftsk_gamma Location: 12307-12442 bp Feature: gene Location: 13131-13517 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpsA (TIGR00717), nuc_hydro (cl00226), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TraG-D_C (pfam12696), Ftsk_gamma (smart00843)