myRT

myRT report for GCA_001566535.1_ASM156653v1

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Seq: LRRO01000911.1 Bacillus cereus strain MB.22 contig1818, whole genome shotgun sequence (96731 bp)
Overview 1 RT 1: 6373-11600 bp Neighborhood of RT #1 [6373, 11605] COG4712 RVT-GII beta_clamp Feature: gene Location: 6373-6768 bp Feature: gene Location: 6791-7147 bp Feature: domain Description: COG4712 Location: 6800-7142 bp Feature: domain Description: COG471 2 Location: 6800-71 42 bp Feature: gene Location: 7909-9807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8224-8926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8224-8926 bp Feature: gene Location: 9885-10412 bp Feature: gene Location: 10493-11605 bp Feature: domain Description: beta_clamp Location: 10496-11600 bp Feature: domain Description: beta_clamp Location: 1 0496-1 1 600 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT beta_clamp (cl29549), COG4712 (Uncharacterized protein ), RVT-GII

Seq: LRRO01000875.1 Bacillus cereus strain MB.22 contig1786, whole genome shotgun sequence (15119 bp)
Overview 1 RT 1: 1229-10960 bp Neighborhood of RT #1 [1229, 10960] DEXDc RVT-GII HNHc RVT-GII HNHc Feature: gene Location: 1229-1456 bp Feature: gene Location: 1528-3207 bp Feature: domain Description: DEXDc Location: 2308-3181 bp Feature: domain Description: DEXDc Location: 2 308-3181 bp Feature: gene Location: 3908-5707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4211-4913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 11-4913 bp Feature: domain Description: HNHc Note: nucleases Location: 5438-5588 bp Feature: domain Description: HNHc Note: nucleases Location: 5438-5588 bp Feature: gene Location: 5801-6766 bp Feature: gene Location: 7484-9370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7796-8534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7796-8534 bp Feature: domain Description: HNHc Note: nucleases Location: 9113-9260 bp Feature: domain Description: HNHc Note: nucleases Location: 9113-92 60 bp Feature: gene Location: 9490-10245 bp Feature: gene Location: 10262-10960 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXDc (smart00487), RVT-GII, HNHc (smart00507)

Seq: LRRO01000923.1 Bacillus cereus strain MB.22 contig1829, whole genome shotgun sequence (734141 bp)
Overview 1 RT 1: 147511-153643 bp Neighborhood of RT #1 [147511, 153672] ARA1 AraJ RVT-GII Intron_maturas2 HNHc HxlR YjgD Feature: gene Location: 147511-148350 bp Feature: domain Description: ARA1 Location: 147526-148342 bp Feature: domain Description: ARA1 Location: 147526-1483 42 bp Feature: gene Location: 148367-149581 bp Feature: domain Description: AraJ Location: 148406-149570 bp Feature: domain Description: AraJ Location: 148406-149570 bp Feature: gene Location: 150360-152177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 150624-151455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 150624-151455 bp Feature: domain Description: Intron_maturas2 Location: 151533-151827 bp Feature: domain Description: Intron_maturas2 Location: 15153 3 -151827 bp Feature: domain Description: HNHc Note: nucleases Location: 151974-152151 bp Feature: domain Description: HNHc Note: nucleases Location: 151974-152151 bp Feature: gene Location: 152452-152796 bp Feature: domain Description: HxlR Location: 152464-152764 bp Feature: domain Description: HxlR Location: 152464-152764 bp Feature: gene Location: 153232-153672 bp Feature: domain Description: YjgD Location: 153241-153643 bp Feature: domain Description: YjgD Location: 153 241-153 643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ARA1 (COG0656), AraJ (COG2814), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), HxlR (pfam01638), YjgD (COG2427)

Seq: LRRO01000904.1 Bacillus cereus strain MB.22 contig1811, whole genome shotgun sequence (75573 bp)
Overview 1 RT 1: 33757-39906 bp Neighborhood of RT #1 [33757, 39906] CcmA CitB RVT-GII HNHc TraC-F-type Feature: gene Location: 33757-34689 bp Feature: domain Description: CcmA Location: 33763-34675 bp Feature: domain Description: CcmA Location: 33763-34 675 bp Feature: gene Location: 34828-35406 bp Feature: domain Description: CitB Location: 34879-35392 bp Feature: domain Description: CitB Location: 34 879-35392 bp Feature: gene Location: 35470-37302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35770-36475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35770-364 75 bp Feature: domain Description: HNHc Note: nucleases Location: 37054-37186 bp Feature: domain Description: HNHc Note: nucleases Location: 37054 -37186 bp Feature: gene Location: 38021-38989 bp Feature: domain Description: TraC-F-type Location: 38441-38915 bp Feature: domain Description: TraC-F-type Location: 384 4 1-38915 bp Feature: gene Location: 38992-39906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CcmA (COG4133), CitB (TIGR02484), RVT-GII, HNHc (smart00507), TraC-F-type (TIGR02746)

Seq: LRRO01000922.1 Bacillus cereus strain MB.22 contig1828, whole genome shotgun sequence (515204 bp)
Overview 1 RT 1: 323509-334943 bp Neighborhood of RT #1 [323509, 334943] RVT-GII HNHc B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat Feature: gene Location: 323509-323700 bp Feature: gene Location: 323713-324126 bp Feature: gene Location: 325133-327061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 325454-326189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 325 45 4-326189 bp Feature: domain Description: HNHc Note: nucleases Location: 326780-326945 bp Feature: domain Description: HNHc Note: nucleases Location: 326780-326945 bp Feature: gene Location: 327230-333595 bp Feature: domain Description: B_ant_repeat Location: 327239-327377 bp Feature: domain Description: B_ant_repeat Location: 327239-327377 bp Feature: domain Description: B_ant_repeat Location: 327614-327767 bp Feature: domain Description: B_ant_repeat Location: 327614-327767 bp Feature: domain Description: B_ant_repeat Location: 328004-328157 bp Feature: domain Description: B_ant_repeat Location: 328004-32815 7 bp Feature: domain Description: B_ant_repeat Location: 328397-328550 bp Feature: domain Description: B_ant_repeat Location: 328397-3285 5 0 bp Feature: domain Description: B_ant_repeat Location: 328793-328949 bp Feature: domain Description: B_ant_repeat Location: 328793-328949 bp Feature: domain Description: B_ant_repeat Location: 329189-329345 bp Feature: domain Description: B_ant_repeat Location: 329189-329345 bp Feature: domain Description: B_ant_repeat Location: 329585-329741 bp Feature: domain Description: B_ant_repeat Location: 3295 85 -329741 bp Feature: domain Description: B_ant_repeat Location: 329981-330134 bp Feature: domain Description: B_ant_repeat Location: 329981-330134 bp Feature: domain Description: B_ant_repeat Location: 330377-330533 bp Feature: domain Description: B_ant_repeat Location: 330377-3305 33 bp Feature: domain Description: B_ant_repeat Location: 330773-330929 bp Feature: domain Description: B_ant_repeat Location: 330773-330929 bp Feature: domain Description: B_ant_repeat Location: 331169-331325 bp Feature: domain Description: B_ant_repeat Location: 331169-331325 bp Feature: domain Description: B_ant_repeat Location: 331565-331718 bp Feature: domain Description: B_ant_repeat Location: 3315 65 -331718 bp Feature: domain Description: B_ant_repeat Location: 331961-332117 bp Feature: domain Description: B_ant_repeat Location: 331961-332117 bp Feature: domain Description: B_ant_repeat Location: 332357-332513 bp Feature: domain Description: B_ant_repeat Location: 33235 7-3325 13 bp Feature: domain Description: B_ant_repeat Location: 332753-332909 bp Feature: domain Description: B_ant_repeat Location: 33275 3-332909 bp Feature: domain Description: B_ant_repeat Location: 333149-333302 bp Feature: domain Description: B_ant_repeat Location: 333149-333302 bp Feature: gene Location: 333873-334943 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), B_ant_repeat (TIGR01451)

Seq: LRRO01000829.1 Bacillus cereus strain MB.22 contig1744, whole genome shotgun sequence (1366 bp)
Overview 1 RT 1: 500-1202 bp Neighborhood of RT #1 [500, 1216] RVT-GII Feature: gene Location: 500-1216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1016-1202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1016 -1202 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: LRRO01000842.1 Bacillus cereus strain MB.22 contig1756, whole genome shotgun sequence (2375 bp)
Overview 1 RT 1: 613-1906 bp Neighborhood of RT #1 [613, 2259] RVT_N RVT-GII GIIM Feature: gene Location: 613-2259 bp Feature: RT Description: RVT_N Location: 655-892 bp Feature: RT Description: RVT_N Location: 655-892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 946-1606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 946-1606 bp Feature: domain Description: GIIM Note: maturase Location: 1675-1906 bp Feature: domain Description: GIIM Note: maturase Location: 167 5-1906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)