myRT

myRT report for GCA_001567815.1_ASM156781v1

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Seq: JQPC01000045.1 Leptospira interrogans strain 20046 Contig051, whole genome shotgun sequence (4089 bp)
Overview 1 RT 1: 1784-4079 bp Neighborhood of RT #1 [1784, 4087] rve_3 group_II_RT_mat RVT-GII RVT-GII PHA02517 Feature: gene Location: 1784-2059 bp Feature: domain Description: rve_3 Location: 1793-1943 bp Feature: domain Description: rve_3 Location: 1 793-1 943 bp Feature: gene Location: 2589-2981 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2634-2817 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2634-281 7 bp Feature: gene Location: 3031-3258 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3037-3235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3037-3235 bp Feature: gene Location: 3266-3439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3272-3425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3272-3425 bp Feature: gene Location: 3467-4087 bp Feature: domain Description: PHA02517 Location: 3476-4079 bp Feature: domain Description: PHA0251 7 Location: 3476-4079 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve_3 (pfam13683), group_II_RT_mat (TIGR04416), RVT-GII, PHA02517 (putative transposase OrfB; Reviewed)

Seq: JQPC01000061.1 Leptospira interrogans strain 20046 Contig068, whole genome shotgun sequence (40383 bp)
Overview 1 RT 1: 29638-36130 bp Neighborhood of RT #1 [29638, 36201] RVT-UG28b DUF932 Feature: gene Location: 29638-29799 bp Feature: gene Location: 30315-31412 bp Feature: gene Location: 31445-33262 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 31880-32594 bp Feature: RT Description: RVT-UG2 8b Note: UG2 8b RT Location: 31880-32 594 bp Feature: gene Location: 33817-35418 bp Feature: gene Location: 35422-36201 bp Feature: domain Description: DUF932 Location: 35488-36130 bp Feature: domain Description: DUF932 Location: 35488-36130 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG28b, DUF932 (pfam06067)

Seq: JQPC01000069.1 Leptospira interrogans strain 20046 Contig077, whole genome shotgun sequence (22933 bp)
Overview 1 RT 1: 15977-21272 bp Neighborhood of RT #1 [15977, 21272] FecR RpoE RVT-GII KOG4768 Feature: gene Location: 15977-17068 bp Feature: domain Description: FecR Location: 16403-16694 bp Feature: domain Description: FecR Location: 16403 -16694 bp Feature: gene Location: 17089-17589 bp Feature: domain Description: RpoE Location: 17095-17575 bp Feature: domain Description: RpoE Location: 17095-17575 bp Feature: gene Location: 18346-19644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18655-19279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18655-19279 bp Feature: domain Description: KOG4768 Location: 19384-19519 bp Feature: domain Description: KOG4768 Location: 193 84-19519 bp Feature: gene Location: 20333-20701 bp Feature: gene Location: 20898-21272 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FecR (pfam04773), RpoE (COG3343), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase )