myRT

myRT report for GCA_001569125.1_ASM156912v1

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Seq: JQQW01000050.1 Leptospira interrogans strain 56610 Contig050, whole genome shotgun sequence (39463 bp)
Overview 1 RT 1: 29085-35577 bp Neighborhood of RT #1 [29085, 35648] RVT-UG28b DUF932 Feature: gene Location: 29085-29246 bp Feature: gene Location: 29762-30859 bp Feature: gene Location: 30892-32709 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 31327-32041 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 31 327-32041 bp Feature: gene Location: 33264-34865 bp Feature: gene Location: 34869-35648 bp Feature: domain Description: DUF932 Location: 34935-35577 bp Feature: domain Description: DUF932 Location: 34935-35577 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG28b, DUF932 (pfam06067)

Seq: JQQW01000120.1 Leptospira interrogans strain 56610 Contig120, whole genome shotgun sequence (19329 bp)
Overview 1 RT 1: 328-3621 bp Neighborhood of RT #1 [328, 3995] RVT-GII KOG4768 RpoE FecR Feature: gene Location: 328-1626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 637-1261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 637-12 61 bp Feature: domain Description: KOG4768 Location: 1366-1501 bp Feature: domain Description: KOG4768 Location: 1366-1501 bp Feature: gene Location: 2383-2883 bp Feature: domain Description: RpoE Location: 2389-2869 bp Feature: domain Description: RpoE Location: 2 389-2 869 bp Feature: gene Location: 2904-3995 bp Feature: domain Description: FecR Location: 3330-3621 bp Feature: domain Description: FecR Location: 3330-362 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RpoE (COG3343), FecR (pfam04773)

Seq: JQQW01000178.1 Leptospira interrogans strain 56610 Contig178, whole genome shotgun sequence (2007 bp)
Overview 1 RT 1: 98-1637 bp Neighborhood of RT #1 [98, 1753] RVT-GII RVT-GII group_II_RT_mat rve_3 Feature: gene Location: 98-271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104-257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104-257 bp Feature: gene Location: 279-506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285-483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285-483 bp Feature: gene Location: 556-948 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 601-784 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 601-784 bp Feature: gene Location: 1478-1753 bp Feature: domain Description: rve_3 Location: 1487-1637 bp Feature: domain Description: rve_3 Location: 1487-163 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416), rve_3 (pfam13683)