myRT

myRT report for GCA_001569565.1_ASM156956v1

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Seq: BCOA01000037.1 Salmonella enterica DNA, contig: contig000037, strain: NGUA02, whole genome shotgun sequence (444906 bp)
Overview 1 RT 1: 278128-284253 bp Neighborhood of RT #1 [278128, 284435] PRK05658 PRK10201 RVT-UG11 5 Feature: gene Location: 278128-280110 bp Ori: GAR00641.1 Gene: rpoD Feature: domain Description: PRK05658 Location: 278266-280108 bp Feature: domain Description: PRK05658 Location: 278266-2801 08 bp Feature: gene Location: 280234-280740 bp Ori: GAR00642.1 Gene: mug Feature: domain Description: PRK10201 Location: 280237-280735 bp Feature: domain Description: PRK1 0201 Location: 280237-280735 bp Feature: gene Location: 281064-281828 bp Ori: GAR00643.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 281187-281640 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 281 1 87-281 640 bp Feature: gene Location: 281798-281983 bp Feature: gene Location: 282735-284435 bp Ori: GAR00645.1 Feature: domain Description: 5 Location: 283959-284253 bp Feature: domain Description: 5 Location: 283959-284253 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), PRK10201 (G/U mismatch-specific DNA glycosylase), RVT-UG11, 5 (PHA02596)

Seq: BCOA01000066.1 Salmonella enterica DNA, contig: contig000066, strain: NGUA02, whole genome shotgun sequence (240625 bp)
Overview 1 RT 1: 193321-196326 bp Neighborhood of RT #1 [193321, 196337] TIR-like RVT-Retrons InsE Feature: gene Location: 193321-193431 bp Feature: gene Location: 193497-194336 bp Ori: GAR02799.1 Feature: domain Description: TIR-like Location: 193902-194256 bp Feature: domain Description: TIR-like Location: 193902 -1942 56 bp Feature: gene Location: 194386-195345 bp Ori: GAR02800.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 194566-195088 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 194566-195088 bp Feature: gene Location: 195376-195603 bp Feature: gene Location: 196035-196337 bp Ori: GAR02802.1 Feature: domain Description: InsE Location: 196044-196326 bp Feature: domain Description: InsE Location: 196044-19632 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIR-like (pfam10137), RVT-Retrons, InsE (COG2963)